Gossypium arboreum (tree cotton): 108461753
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Entry
108461753 CDS
T05776
Name
(RefSeq) transcription factor SPATULA-like isoform X1
KO
K28361
transcription factor SPT/ALC
Organism
gab
Gossypium arboreum (tree cotton)
Pathway
gab04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
gab00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
108461753
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
gab03000
]
108461753
Transcription factors [BR:
gab03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
HLH domain only
108461753
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Motif
Pfam:
HLH
bHLH_SAC51
Ribosomal_S20p
bHLH_LHW
CENPU
Motif
Other DBs
NCBI-GeneID:
108461753
NCBI-ProteinID:
XP_017617171
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Position
11:complement(33259613..33262979)
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AA seq
394 aa
AA seq
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MGDNLNLNMFHYKNINNNCYNYNNGTCLPPPPPSDDISNLLHQILGHSSSYSSSSSSSSG
MAHFGGPSENPRRLSPSPAPPGGGVKQGGGWGLIGAPGENDTDEYDCESEFEICHKQEGI
EALVDEAPPKPAPPRSSSKRSRAAEVHNLSEKRRRSRINEKMKALQNLIPNSNKTDKASM
LDEAIEYLKQLQLQVQMLSMRNGLSLHPMCLPGVLQPLQFSQTRMNFGEENGSLPINMSE
TVPANPETSVQMVFDLPNQCSSSNPGSVPNISNIITSETSFGLESIQAHFWPFQLLPSSQ
DICREDILHHHQLKTNTPEFGLVATTTVSLPFDTQESDLKEIYSLDASTMRTEQSNSVLL
KNLDHDLILSPHHPRKQAGRSDTGDEIGIDRPNF
NT seq
1185 nt
NT seq
+upstream
nt +downstream
nt
atgggagataaccttaaccttaacatgtttcattataagaatatcaataataattgctat
aattataataatgggacgtgtttacctcctcctcctccttcagatgatatatccaacctt
cttcatcaaattctaggtcattcttcttcttattcttcttcgtcttcgtcatcttctgga
atggcccactttgggggaccatctgagaatccacggcggttatcaccgtcaccagcaccg
cccggtggtggagtgaagcaaggtggagggtggggtttgattggagctcctggtgagaac
gataccgatgagtacgactgtgaaagtgagtttgaaatttgtcataagcaggagggtatt
gaagcactggtggatgaggcaccaccaaagccagctccacctcgtagttcctcaaaaaga
agcagagctgcggaggttcacaatttgtctgaaaagaggaggagaagtaggattaatgag
aaaatgaaagcattgcaaaaccttattccaaattctaacaagactgataaggcttcgatg
cttgatgaagctatcgagtacttaaagcagcttcagcttcaagttcagatgctatcaatg
agaaatggattaagcttgcatccaatgtgcttgcctggagttttgcaaccactacagttt
tcccaaacaagaatgaacttcggtgaagaaaatgggtctctacccataaacatgtcggaa
acagtaccagcaaatccggaaacctcggtgcagatggtttttgatctacccaaccaatgc
agttcctcaaaccctggatcagtaccaaacatttcaaacataattacttcggaaacttca
tttggattggaatcaatccaggctcatttttggccatttcagctcctcccatcatctcag
gatatttgcagggaagacattctgcatcatcatcaactgaagacaaacacaccagaattt
ggtctagttgcaacgaccacagtttcacttccctttgatacacaagaatctgatctaaag
gaaatctattcccttgatgctagtacgatgagaacagagcaatcaaacagtgtactctta
aagaatttggaccatgaccttatactttctccgcaccatccccgtaagcaagcaggaaga
agtgacaccggtgatgaaatagggatagacagaccgaacttctga
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