Gossypium arboreum (tree cotton): 108461810
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Entry
108461810 CDS
T05776
Name
(RefSeq) crossover junction endonuclease MUS81 isoform X1
KO
K08991
crossover junction endonuclease MUS81 [EC:3.1.22.-]
Organism
gab
Gossypium arboreum (tree cotton)
Pathway
gab03440
Homologous recombination
gab03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
gab00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
108461810
03460 Fanconi anemia pathway
108461810
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gab03400
]
108461810
DNA repair and recombination proteins [BR:
gab03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
108461810
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
ERCC4
WHD_MUS81
EME1-MUS81_C
HHH_8
UBA_9
Motif
Other DBs
NCBI-GeneID:
108461810
NCBI-ProteinID:
XP_017617240
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Position
13:complement(1409733..1416080)
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AA seq
634 aa
AA seq
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MERNRRVLCPENEELANYLLQKRQELADKPKGIKENTDLTLSKAYNNICNAQHPIKTLKD
LNDIKGVGKWIIVLMRGYFDSGSGSSEPEEITRKGTCKKTKGNRRYLPQKNSVAYALLIT
LYRETADGNEFMHKQDLIDAAEASGLSRAPIAPEKGKGKPSQFGSSPRDWYSGWSCMSIL
IKKGLVVKSSCPAKYMLTPEGKEAARECLMKSKMEDPLENLVDVERLSQPDTQDAFVQDL
CHSDSDIEEINERAAFKRKTSIDIPLDCLERCTRMGYSKEQVLSAFAEVSETSKNKEISS
LWPAVLCRLREDQVYGQEAHNGVQSSWMQSSKNGGDMPNLCTMRACSSSRPSSDSLKADM
NVLSVPPLSFGEKFEDTYEVILILDDREQFTSQGARSKKMLEKICSEFKIKIDVRRLPIG
DGIWIARHKHLSSEYVLDFIVERKKVADLRSSIRDNRYKDQKLRLLRSGLKKLIFLVEGD
PNTSEAAESIKTACFTTEILEGFDVQRTSGLLDTLRKYAYLTRAIAQYYKLHLPEDHSKL
SGVCPPFNEFIKRCQELDKMTVSDVFSIQLMQVPQVTEEVAIAVVDLYPTLVSLANAYSL
LEGDVCAQEEMLRKQSNNKVSSVASKNIFRFIWC
NT seq
1905 nt
NT seq
+upstream
nt +downstream
nt
atggagagaaataggcgagtactgtgtccagagaatgaggaattagcaaattacttgctg
caaaagaggcaagagctggccgataaacccaaaggaataaaagaaaacactgacttgact
ctttcaaaggcttacaacaacatttgcaatgctcagcatcccatcaaaacactcaaagat
ctcaatgacatcaaaggtgttgggaaatggattatagtgcttatgcgtggctatttcgat
agtggttcaggaagttcagaaccagaagagataaccagaaagggtacatgtaaaaaaact
aaaggaaacagacgttatttgccccaaaagaactcagtggcatatgcgttgttgattaca
ttatacagggagactgcagatgggaatgaatttatgcataagcaagatcttattgatgct
gccgaagcaagtgggctttcacgagcgccaattgcgccagagaaaggaaaagggaagccc
agccaattcggaagttctcctagggactggtatagtggatggagctgcatgtcaatactg
ataaagaagggattggttgtgaaatcaagttgtccagcaaaatatatgctaacgccagaa
ggcaaggaagcagcacgtgaatgtctcatgaaatctaaaatggaagatccccttgaaaat
ttggttgatgtggaaaggctttctcaaccagacacacaggatgcatttgttcaggactta
tgtcattctgattcggatatagaagagataaatgaaagagctgcttttaagaggaaaaca
tccattgatattccacttgattgtcttgaaaggtgtactcgcatggggtactcaaaggaa
caagttttgtctgcttttgctgaggtctctgaaacttccaagaacaaggagatttcttca
ctttggccagcggtcttgtgtcgccttcgagaagatcaagtttacgggcaagaagctcat
aatggagtgcaaagttcttggatgcaatcaagtaaaaatggtggagatatgccgaacttg
tgtacgatgagagcctgttcttcctctagaccaagttcagatagtctgaaagcagatatg
aatgtcttaagtgttccacctctgagcttcggggagaaattcgaggatacatatgaagta
atcttaatattagatgatcgagagcaatttaccagtcaaggtgcgcgctccaagaaaatg
ttagagaagatttgctcagaattcaaaattaaaatagatgttagaaggttgcctattgga
gatggaatttggatagctcgccataaacatctttccagtgaatatgttctagactttatt
gttgagaggaagaaagttgctgatttacggtcttcaatacgggataaccgctacaaggac
caaaaactaaggcttctgagatctggactaaagaagctgatatttcttgtggaaggtgat
ccgaatacttcagaagctgctgaaagcatcaaaacagcgtgcttcacaacagagatcctg
gaggggtttgatgttcagagaacaagcggtttacttgataccctgaggaagtatgcatat
cttactcgagcaatagctcaatattataagctgcatctgcctgaggaccattctaaattg
tctggggtctgtcctccctttaatgaatttatcaaaaggtgccaagagctggataaaatg
acagtcagtgatgtattttccattcaacttatgcaggtaccccaggtgactgaggaggtt
gccatagctgttgtcgatttgtatccaacactagtatcacttgccaatgcgtactctctt
cttgagggtgatgtatgtgcacaagaggaaatgcttaggaagcaaagtaacaacaaggtg
agctctgttgctagtaagaatatttttcggtttatttggtgctga
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