Gossypium arboreum (tree cotton): 108461815
Help
Entry
108461815 CDS
T05776
Name
(RefSeq) replication factor C subunit 3-like isoform X1
KO
K10756
replication factor C subunit 3/5
Organism
gab
Gossypium arboreum (tree cotton)
Pathway
gab03030
DNA replication
gab03410
Base excision repair
gab03420
Nucleotide excision repair
gab03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
gab00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
108461815
03410 Base excision repair
108461815
03420 Nucleotide excision repair
108461815
03430 Mismatch repair
108461815
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
gab03032
]
108461815
03036 Chromosome and associated proteins [BR:
gab03036
]
108461815
03400 DNA repair and recombination proteins [BR:
gab03400
]
108461815
DNA replication proteins [BR:
gab03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
108461815
DNA Replication Termination Factors
ELG1-RFC complex
108461815
Chromosome and associated proteins [BR:
gab03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
108461815
DNA repair and recombination proteins [BR:
gab03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
108461815
Check point factors
HRAD17(Rad24)-RFC complex
108461815
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RFC_C
DNA_pol3_delta2
RCF1-5-like_lid
AAA
Rad17
Sigma54_activ_2
AAA_22
Mg_chelatase
AAA_23
AAA_5
DUF815
RuvB_N
AAA_29
ABC_tran
AAA_2
AAA_16
RsgA_GTPase
AAA_24
nSTAND3
TPGS1_C
Motif
Other DBs
NCBI-GeneID:
108461815
NCBI-ProteinID:
XP_017617248
LinkDB
All DBs
Position
13:118685657..118690325
Genome browser
AA seq
354 aa
AA seq
DB search
MLWVDKYRPKTLDQAMVHQEIALNLKKLVAEQDCPHLLFYGPSGSGKKTLIMALLRQIFG
PSAEKVKVEIKNWKIDAGSRTIDLELTMLSSANHVELSPSDAGFQDRYIVQEIIKEMAKN
RPIDTKGKKGYKVLILNEVDKLSREAQHSLRRTMEKYSASCRLILCCNSSSKVTEAIRSR
CLNIRINAPSEEQIIKVIEFIGKKEGLQLPSGFAARIAEKSNRSLRRAILSFETCRVQQY
PFTSNQAILPMDWEEYISEIATDIMKEQSPKRLFEVRGKVYELLINCIPPEIILKRLLHE
LLKKLDAELKHEVCHWAAYYEHRMRLGQKAIFHIEAFVAKFMSIYKAFLIATFG
NT seq
1065 nt
NT seq
+upstream
nt +downstream
nt
atgttgtgggttgataaataccgacccaaaaccctagaccaagctatggttcatcaagag
attgccctgaatctcaagaaactggttgcagagcaggattgccctcacttactcttctat
ggaccatctgggtctggcaagaaaaccctaattatggctcttcttagacaaatttttggt
ccctctgctgaaaaggtgaaagtggagattaagaactggaaaattgatgctggaagtaga
acaattgatctggagttgaccatgttgtcaagtgccaaccatgtggaattgagtccaagt
gatgcaggctttcaggacagatacatagttcaagagataattaaggaaatggctaaaaat
agaccaattgacaccaaagggaaaaaaggatataaagtgctgattctcaatgaagttgac
aagctttcaagagaagcccagcattcactccgaagaacaatggagaagtacagtgcttct
tgccgtctaattttgtgctgtaatagttcttcaaaagtcactgaagccattcggtctcgt
tgtttgaacattcgaataaatgctccttcagaagaacagatcattaaggtgatagagttc
attggaaagaaagaagggttgcaacttccatctggttttgcggcccgcattgcagaaaag
tcaaataggagtttaaggagagctatattgtcatttgagacttgccgtgttcaacagtac
cctttcacaagcaaccaagcaattctgccaatggattgggaggaatatatatctgaaata
gcaactgatataatgaaggagcaaagccctaaaaggctgtttgaggttcgagggaaggtg
tatgaattgcttataaattgtattccacctgagattatcctgaagaggctccttcatgag
ttattgaagaaattggatgcagagctaaaacacgaggtgtgccattgggctgcgtattat
gagcataggatgcgtcttggacagaaagccatctttcatattgaagcatttgttgccaag
ttcatgagcatttacaaggccttcctgattgcaacatttggctga
DBGET
integrated database retrieval system
