Gossypium arboreum (tree cotton): 108461829
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Entry
108461829 CDS
T05776
Name
(RefSeq) nuclear transcription factor Y subunit A-7-like isoform X1
KO
K08064
nuclear transcription factor Y, alpha
Organism
gab
Gossypium arboreum (tree cotton)
Brite
KEGG Orthology (KO) [BR:
gab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
gab03000
]
108461829
Transcription factors [BR:
gab03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
Heteromeric CCAAT factors
108461829
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Gene cluster
GFIT
Motif
Pfam:
CBFB_NFYA
DUF5547
Ig_Shg
Motif
Other DBs
NCBI-GeneID:
108461829
NCBI-ProteinID:
XP_017617269
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All DBs
Position
13:124550155..124553825
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AA seq
323 aa
AA seq
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MAVRVQNFPKKTFDESSVRSLSHLSVSCTPWWSLNEQQIEEPLPHNISLKVETPSQLYHH
AKHLDLQLPDQELTTVQAIDRTHCEVGAIGVTSSQRDPSESAGPFESCEKDTEGQVKPVF
LVNNPNTLFSPSHQNYNHSMACTQYPYANAYFNGLFTPYGPQAIIQAQLGGNAPTRIPLP
LDLAEDEPIYVNPKQYHGILRRRQYRAKLEAQNKLVKSRKPYLHESRHRHALNRVRGSGG
RFLSKKTLQQPNVICNNQTNSISELESHCSRMAGYDGPNTSCMNISSVSNNDCNLQRLEH
GFANISRAGGTGDGIRHGASVVQ
NT seq
972 nt
NT seq
+upstream
nt +downstream
nt
atggctgttcgggtccaaaattttccgaagaaaacatttgacgaaagctctgttcgttcc
ctatcccatttatctgtcagttgcacaccgtggtggagtttgaacgagcagcaaattgaa
gagcctttaccccacaacataagcttgaaagtggaaactccgtctcaactctatcatcac
gcgaagcatttagatcttcaactacctgaccaggaattgacaacggttcaagcaattgat
cgaactcattgtgaagttggtgccattggagtgaccagttctcaacgtgatccatcagaa
tccgcaggtccatttgaaagttgtgagaaggataccgagggtcaagtgaagccggttttc
ttggttaacaatccaaacactttattcagcccctctcatcagaattataaccactcaatg
gcttgcactcaatatccatatgccaatgcttacttcaatgggctgtttactccatatggg
ccacaggctattattcaggcccagttgggaggaaatgctccaactcgaattccactgcct
ctcgatcttgcagaggatgagcccatttatgttaacccaaaacaatatcatggtattctc
cggaggaggcaataccgtgcaaagcttgaggcacaaaacaaactcgtcaaatctcgaaag
ccataccttcatgaatctcgacatcgtcatgcactgaatagggttaggggatcaggagga
cgttttcttagcaaaaagacactccagcagcccaatgtcatctgcaataatcaaacgaat
agtatatcagaactagagagtcattgttctcgcatggccggatatgacggtccgaataca
agctgcatgaacatctcgagcgtttccaacaatgactgcaatttacagcggctagaacat
ggattcgccaatatatcacgtgcaggcggtacaggcgatggaatacggcacggtgcttct
gttgtccagtga
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