Gossypium arboreum (tree cotton): 108462831
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Entry
108462831 CDS
T05776
Name
(RefSeq) probable galacturonosyltransferase 3 isoform X1
KO
K13648
alpha-1,4-galacturonosyltransferase [EC:
2.4.1.43
]
Organism
gab
Gossypium arboreum (tree cotton)
Pathway
gab00520
Amino sugar and nucleotide sugar metabolism
gab01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
gab00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00520 Amino sugar and nucleotide sugar metabolism
108462831
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
gab01003
]
108462831
Enzymes [BR:
gab01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.43 polygalacturonate 4-alpha-galacturonosyltransferase
108462831
Glycosyltransferases [BR:
gab01003
]
Polysaccharide
Structural polysaccharide
108462831
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_8
Glyco_transf_24
Motif
Other DBs
NCBI-GeneID:
108462831
NCBI-ProteinID:
XP_017618221
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All DBs
Position
13:3512370..3516476
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AA seq
681 aa
AA seq
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MEAASRNLLSFISMLPTCFILVIFSFTIVDAEISNSKTIGRGLKAYGQLPDRKELATPSS
ALFFDDNEKDIDIIATYSDASGTIRTSRVKMKDLSASWVLENPISGDPGKQKGSQVFKLK
DSYQASRRSEENVEHFIDEHHWQEDEIQNRRKASWSPVKFKRQMLRQKRWDLRTADLILQ
NKEGDKQMEATSAIEDLKNMDPVVNGKYSIWRRDFENPNSDSTLKLMRDQIIMAKAYANI
AKSRNQIDLYSSLLRHVGDSLRVIGDANSDSELHPSSLDQAKAMGHALSFAKDRLYDCHI
VARKLRAMLQSAEDNVNSLKKRSAFLIQLAAKTVPKPLHCLPLQLAADYYFHGYQRKKDL
NIEKLEDPSLYHYAIFSDNVLATSVVVNSTVLHANEPEKHIFHIVTDKLNFAAMRMWFIL
NAPEKATVQVENIDDFKWLNSSYCSVLRQLESARVKEYYFKNHPSSLSVGSDNLKYRNPK
YLSMLNHLRFYLPEVYPKLHKILFLDDDIVVQKDLTPLWDVDLNGMVNGAVETCKGSFHR
FDKYLNFSNPKISENFDSNACGWAFGMNIFDLKEWRNRNITQIYHYWQDRNEDRTLWKLG
TLPPGLITFYNLTYPLDRKWHVLGLGYDPALNQTEIENAAVVHYNGNYKPWLDLAVAKYK
SYWSKYVRFDNYYLKLCNLSE
NT seq
2046 nt
NT seq
+upstream
nt +downstream
nt
atggaagctgcttcgaggaatttattgagcttcatttccatgctacccacatgtttcata
ctcgttattttcagttttaccattgttgatgcagaaatatcaaatagcaaaacgattgga
agaggactcaaagcatatgggcaactgcctgacagaaaggaactggcaacgccctcttct
gctctatttttcgatgacaatgagaaggatattgacataattgcaacttacagtgatgct
tctgggactattagaacaagtagggtgaaaatgaaggatctttctgcttcttgggttctg
gaaaaccccatcagtggagatcctggcaaacaaaagggctcacaggtatttaaactaaaa
gattcctaccaagctagcagaagatctgaagaaaacgtcgaacattttattgatgagcat
cattggcaagaagatgaaattcaaaatcgtcgcaaggcatcatggagccctgtgaagttc
aagcgccagatgttgcggcaaaaaaggtgggatcttcgtaccgcggaccttatcctccaa
aacaaagagggtgacaagcagatggaagcaacatctgctattgaggacttgaaaaatatg
gaccctgttgtcaatggaaagtatagtatatggagaagagattttgaaaatcctaactct
gattctaccttgaagcttatgcgtgaccagattatcatggcaaaagcctatgcaaatatt
gccaagtctaggaaccaaattgatctttacagttctcttttgagacatgttggtgacagt
ctacgtgttattggagatgctaattctgattctgagcttcatcctagttcacttgatcag
gcaaaagcaatgggccatgctctatcttttgcgaaggatcggctctatgattgccatata
gttgcaaggaagcttcgagccatgcttcagtcagcagaagataatgtaaattctctgaag
aaaaggagtgccttcttgattcagctagctgcaaaaactgtcccaaaaccattgcattgc
ctacctctgcagctagcagcagactattacttccatggatatcagagaaaaaaggatctt
aatatagaaaagcttgaagatccttctttgtatcattatgccatcttttccgataacgta
ctggcaacatccgtggtcgtcaattctacagtgcttcatgcaaatgagcctgagaaacac
attttccatatagtgacagataaactgaattttgctgcaatgagaatgtggtttatcttg
aatgctcctgaaaaggctacagttcaggttgagaacattgatgattttaagtggttgaat
tcctcttactgttctgttctacgtcagctcgaatctgccagagttaaagaatattatttc
aagaatcatccatcctctctctctgttgggtccgacaatctcaagtacaggaatccaaaa
tacttgtcgatgctgaatcaccttcgattctatcttcctgaggtgtacccaaaactccac
aagatcctatttttggatgatgatattgtagtccagaaggatttgacacctctttgggat
gttgatctgaatggaatggtgaatggtgcagtggagacctgtaaagggagctttcataga
ttcgacaagtatctcaatttcagcaatccgaaaatctcagagaactttgactccaatgca
tgtggttgggcatttgggatgaatattttcgatctgaaggagtggagaaaccggaacatt
acacaaatatatcattattggcaagataggaacgaggatcgaactctttggaagctcggc
acgttgccaccaggactgatcactttctataacttaacctatccattggatcgaaaatgg
cacgtattaggactcgggtatgacccagccctgaaccaaactgagatagaaaatgcagct
gtcgtccattacaatggaaactataagccatggttggatctggctgtagccaagtacaag
tcatactggtccaaatatgtaaggttcgataactattaccttaaactctgcaacttaagc
gaatag
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