Gossypium arboreum (tree cotton): 108462923
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Entry
108462923 CDS
T05776
Name
(RefSeq) uncharacterized protein LOC108462923
KO
K22817
non-structural maintenance of chromosomes element 1 [EC:
2.3.2.27
]
Organism
gab
Gossypium arboreum (tree cotton)
Brite
KEGG Orthology (KO) [BR:
gab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
gab04121
]
108462923
03400 DNA repair and recombination proteins [BR:
gab03400
]
108462923
Enzymes [BR:
gab01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
108462923
Ubiquitin system [BR:
gab04121
]
Ubiquitin ligases (E3)
Atypical E3
108462923
DNA repair and recombination proteins [BR:
gab03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
SMC5-SMC6 complex
108462923
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_Nse1
zf-RING-like
TBC1D23_C
Zn_Ribbon_YjdM
SLX1_C
Motif
Other DBs
NCBI-GeneID:
108462923
NCBI-ProteinID:
XP_017618327
UniProt:
A0A0B0NC50
LinkDB
All DBs
Position
1:complement(6379355..6381351)
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AA seq
316 aa
AA seq
DB search
MAVLSWKHHTLIQSLLERGPLTEKEFHLIFTGITGQNPGTHQGKFNDYLLKINRELSYVQ
LDLRACRDPYDGRVYFGVVNNVSDDQSKLGTKYSVPQIAFFKAIVETIAQDVTAEGTICN
LDALNIKLENQVLNSSGSQSQDVPAAFKNFTMSHKEKTLDQLVKDKWLCYTEDDNIGLGV
RSILDLRSWFHNVGVPSCQVCNEAGFKAKLCPNDGCVVRIHHYCLKKRFSQKGVLVCPSC
ETQWQYQPPKAEPIEVENEETEPVQSQPSSNPSPSQPSLRSKRKRQRLNDAETAGCSSQE
SGANRKRVTRSSAHPR
NT seq
951 nt
NT seq
+upstream
nt +downstream
nt
atggcggtgctaagctggaagcatcacacgctcattcaatcgttgcttgaacgcggtcct
ctaacggagaaagagttccacttaattttcactggcatcaccggccaaaacccgggtacc
catcaagggaaattcaatgattatcttctcaagataaacagggaactttcttatgttcaa
ttggatttaagggcttgtagagatccgtacgacggtcgagtttattttggagttgttaac
aatgtttcggacgatcaatcgaagcttggaaccaaatattctgtcccacaaattgctttc
tttaaggctattgtcgaaacaatagcacaagatgttacagcagagggcactatctgcaac
ctggatgctctcaatattaagttggagaaccaggttctaaacagttcggggtcgcaatct
caggatgtccctgctgcattcaagaacttcacgatgtctcataaggaaaaaacactcgat
caactagtgaaagacaagtggctttgttacactgaagacgataatatcggacttggtgtt
aggtccattctcgatctgcgaagttggttccataatgtgggggttccttcatgccaagtc
tgcaatgaagctggatttaaggccaaattgtgcccaaacgatggttgtgtggttcgaatt
catcattactgcctaaagaagagattttctcagaaaggcgtgttagtttgtccaagttgt
gaaactcagtggcagtaccagccacccaaggcggaacccatagaagtcgagaatgaagaa
actgagcccgtccaaagccagccatcttccaatcccagtccgagtcaaccatctttaaga
tccaagagaaagaggcaaagactcaacgatgcagaaactgccgggtgtagctctcaggaa
tcaggtgctaataggaaaagagtaactaggagctctgcacatccaaggtga
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integrated database retrieval system
