Gossypium arboreum (tree cotton): 108463066
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Entry
108463066 CDS
T05776
Name
(RefSeq) LOW QUALITY PROTEIN: zinc finger protein NUTCRACKER-like
KO
K25870
zinc finger protein IDD3/4/5/6/7/8/9/10/11/12/13
Organism
gab
Gossypium arboreum (tree cotton)
Brite
KEGG Orthology (KO) [BR:
gab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
gab03000
]
108463066
Transcription factors [BR:
gab03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
108463066
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Gene cluster
GFIT
Motif
Pfam:
C2CH-4th_BIRD-IDD
C2H2-2nd_BIRD-IDD
C2CH-3rd_BIRD-IDD
zf-C2H2
zf-C2H2_4
zf-C2H2_STOP2_C
zf-C2H2_jaz
zf-C2H2_6
zf-met
Motif
Other DBs
NCBI-GeneID:
108463066
NCBI-ProteinID:
XP_052881456
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All DBs
Position
3:complement(8269573..8271367)
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AA seq
462 aa
AA seq
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MLETMAEEPVSNGFMQNPVPGSNNPPVAKRKRNLPGTPDPEAEVIALSPKTLMATNRFLC
EICGKGFQRDQNLQLHRRGHNLPWKLKQRTTKEVRKRVYVCPEKTCVHHHPSRALGDLTG
IKKHFYRKHGEKKWKCEKCSKRYAVQSDWKAHSKTCGTREYKCDCGTLFSRRDSFITHRA
FCDALAEETARVNAASSMHSLATTNFSYQLMGNPLDTGMPQHFXSIFKTISSNDETIDQT
RRGFSLWMGQAPQGHDSIGKSLQEIQQFGSLNSGSMYSDPLVSTSNPPASDYQLNWVFGN
KVSSGNAEDQLTSTSLPLNNNVKENGTQLVSIPSLFSTQHQSQQTPSFSMSATALLQKAA
QIGATSTDTSFLGSFGTKCSNSQVQDGSKYSDLYVSNTQTTTLGCDMENSANDISTLNQL
QMYPAKRRYLQNEESGGGQTRDFLGVGVQQAICHPSSINGWI
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
atgctagagacgatggcagaagaaccggtttcaaatggttttatgcagaatcctgttcct
ggatccaataaccctcctgttgcaaagaggaagagaaacctaccaggaacaccagatcct
gaagctgaagtgatagctttgtccccaaagactctgatggcaaccaacaggtttttgtgt
gaaatatgcggcaagggtttccaaagagaccaaaaccttcaactccataggcgaggccat
aaccttccatggaagttgaagcaaaggactacaaaggaagtgagaaagcgggtgtatgtg
tgccctgaaaagacctgcgtccatcaccatccttccagggctctcggggacctgactggc
ataaagaaacacttttatcggaagcacggggagaagaagtggaagtgtgagaagtgttca
aagcgatacgctgtgcagtcagattggaaagctcactcaaagacctgcggcaccagggag
tacaaatgcgattgtggtactctattttcaagaagagatagcttcatcacgcacagggct
ttctgtgatgctttggctgaggaaacagctagagtaaatgcagcttccagcatgcacagc
ttggccaccaccaatttcagttaccaacttatggggaatccattagatactgggatgcca
caacattttncctctatcttcaaaacaatttcaagcaatgatgaaaccatagatcaaact
agacgtggtttttccttgtggatgggccaagcacctcagggccatgattcaattggcaaa
agtctccaagagattcaacaatttggttctttgaattcgggatccatgtacagcgatccc
ctggtttcgacatcgaatcctccggcatcagattatcagttaaactgggtgtttggcaac
aaggtctcatccggtaatgctgaagatcagctaaccagcacttcacttcctttgaacaat
aatgtcaaggaaaatggaactcaacttgtgagcattccttcattatttagcacccaacac
cagtctcagcaaaccccatctttcagtatgtctgccacagctttattacaaaaagctgcc
caaattggtgccacttcaactgacacttcattcctaggaagcttcgggaccaagtgtagc
aacagtcaagttcaagatgggagtaaatacagtgatctgtatgtgtcaaacacacaaacg
actaccctaggatgtgacatggaaaattcggcaaacgatatttccacgttgaatcaattg
caaatgtacccagcaaaacgccggtacttgcagaatgaagaaagtgggggaggacaaaca
agggattttttgggtgtgggagtacagcaggccatctgtcacccatcttcaatcaatgga
tggatatga
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