Gossypium arboreum (tree cotton): 108463089
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Entry
108463089 CDS
T05776
Name
(RefSeq) probable cyclic nucleotide-gated ion channel 14
KO
K05391
cyclic nucleotide gated channel, plant
Organism
gab
Gossypium arboreum (tree cotton)
Pathway
gab04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
gab00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
108463089
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
gab04040
]
108463089
Ion channels [BR:
gab04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
108463089
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GFIT
Motif
Pfam:
Ion_trans
cNMP_binding
UBM
Motif
Other DBs
NCBI-GeneID:
108463089
NCBI-ProteinID:
XP_017618520
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All DBs
Position
13:123190819..123193857
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AA seq
707 aa
AA seq
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MESKMKELVRFNNNGSTDIKKPVPVYKATVPLLKTEGGHSDSNSNSRIPKFGKFKVFPED
HEPRKERILDPGSETFLQWNRIFLFWCLVALFVDPLFFYMPSVINKDTTSCMDTDLNLGI
IVTCFRTLADAFYALHIIIKFRTAYESPNSRVFRRGELVTDLHMIASRYLKSDFFIDLLA
ALPLPQIMIWFIIPATRSSHGDYTNNALVLIVLVQYVPRLYLIFPLSSQIIKNTGVVTKT
AWAGAAYNLLLYMLASHVLGASWYLLSVERHVICWKSECKKETSPLQCNPHYLDCGTLGD
GGRRKWENGTVVFTKCHHDNDISFDYGIFEIALTKQVLSSSFLQKYFYCLWWGLQNLSSY
GQALNTSTFVWETLFAILIAILGLVLFAHLIGNMQTYLQSITVRLEEWRLKRRDTEEWMR
HRQLPQDLRERVQCFVQYKWLATRGVDEESILRALPPDLRRDIQRHLCLDLVRRVPFFSQ
MDDQLLDAICERLVSSLSTQGTYIVREGDPVTEMLFIIRGRLESCTTNGGRTGFFNSINL
RPGDFCGEELLSWALLPKSSSNLPSSTRTVRTLVEVEAFVLRAEDLKFVANQFRRLHSKK
LQHTFRYHSYHWRTWGACFIQAAWRRHVKRTMARNLSVTECDQRQQGEEHSVVSSKSSHV
KLNLGVTILASKFAANTRRGAQRMKDVEMPKLQKPLDPDFSAEPDDE
NT seq
2124 nt
NT seq
+upstream
nt +downstream
nt
atggagtccaaaatgaaggaactagtgaggttcaataacaatggcagtactgatatcaag
aagccagtgccagtatacaaagcaacagtccctttgttgaaaactgaaggaggtcattct
gatagtaatagtaatagtagaattcccaaatttggaaaattcaaggtttttccagaggat
catgagcccaggaaggaaagaatcctagatcctggcagtgaaacattcttacaatggaac
aggatttttctcttttggtgcttagtagctttatttgttgatccattgtttttctacatg
ccttcagtcatcaacaaagacactacatcttgtatggatactgatttaaatctaggaatc
atcgtcacatgtttccgaacactggccgatgcgttttacgcattgcatataatcatcaag
ttccgaaccgcgtatgaatcgcctaactcccgagtattcaggagaggcgaacttgttacc
gaccttcatatgattgccagcaggtacttgaaatcagatttcttcatagatctactagct
gccctccctcttccccagattatgatatggttcattataccagcaacaaggagctcccat
ggtgactatactaataatgcattggtgctgattgttttagtgcaatatgttccccggttg
tatttaatcttccctttaagctctcagattataaagaatactggtgtcgtcacaaagact
gcttgggctggtgctgcatataatctattgctttacatgttagctagccatgtattaggg
gcatcatggtatttgctgtccgttgaacgacacgtaatatgttggaaatccgaatgcaaa
aaagaaactagccctctgcaatgcaatccccattaccttgactgtggcacattaggtgac
ggtggtcgccggaaatgggaaaacggtaccgttgtgtttactaaatgtcatcatgataac
gatatcagtttcgactacgggattttcgaaattgctttgacaaagcaagtactttcttca
agcttccttcagaagtatttctattgtctatggtggggtttgcagaatttgagctcctat
ggacaagctctaaatacaagtacatttgtgtgggaaaccttgtttgccatactgattgcc
atcttgggtttagttctgtttgcccatttaatcggaaatatgcagacctacctacaatcc
atcactgtgagactagaggaatggaggcttaaacgacgagacaccgaggagtggatgaga
catcgccaactccctcaagacctgcgagaacgtgttcaatgtttcgttcagtataagtgg
cttgcaactcgtggtgtggatgaagaatcgatattacgagccttaccccctgatctccgt
cgagatatccaacgccatctatgtttggaccttgtccggcgcgtcccatttttctcacaa
atggatgatcaactactagatgccatatgtgagcggttagtatcgtctttaagtactcaa
ggaacctacattgttcgggaaggtgaccctgtcacggagatgcttttcattatcagaggg
aggttagagagttgcactacaaatggaggccggaccggtttctttaactcgattaatcta
agaccaggtgatttttgcggcgaggagctactttcttgggctttacttcccaaatcttct
tccaacttgccttcctctacaagaacggtaagaacattagttgaagtggaggcctttgta
ttaagagccgaagatctcaagttcgtggccaaccagtttcgacgtctccacagcaagaag
ttgcaacacacatttaggtaccattcttaccattggaggacatggggtgcctgctttatt
caagcagcttggcgccgacacgtgaagagaacgatggcgagaaaccttagtgtgacggag
tgtgaccaaaggcaacaaggggaagaacacagtgtcgtgtcttcgaagtcttcccatgta
aaactgaatctaggtgtgacaattctagcttcaaagtttgcagcaaatacaaggcgagga
gctcagaggatgaaggatgtagaaatgcctaagttgcaaaagcccctagacccagatttc
tcggcagaaccagatgatgagtag
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