Gossypium arboreum (tree cotton): 108463488
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Entry
108463488 CDS
T05776
Name
(RefSeq) replication factor C subunit 3-like
KO
K10756
replication factor C subunit 3/5
Organism
gab
Gossypium arboreum (tree cotton)
Pathway
gab03030
DNA replication
gab03410
Base excision repair
gab03420
Nucleotide excision repair
gab03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
gab00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
108463488
03410 Base excision repair
108463488
03420 Nucleotide excision repair
108463488
03430 Mismatch repair
108463488
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
gab03032
]
108463488
03036 Chromosome and associated proteins [BR:
gab03036
]
108463488
03400 DNA repair and recombination proteins [BR:
gab03400
]
108463488
DNA replication proteins [BR:
gab03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
108463488
DNA Replication Termination Factors
ELG1-RFC complex
108463488
Chromosome and associated proteins [BR:
gab03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
108463488
DNA repair and recombination proteins [BR:
gab03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
108463488
Check point factors
HRAD17(Rad24)-RFC complex
108463488
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RCF1-5-like_lid
RFC_C
DNA_pol3_delta2
AAA_lid_RFC1
RuvB_N
NB-ARC
RsgA_GTPase
Motif
Other DBs
NCBI-GeneID:
108463488
NCBI-ProteinID:
XP_017618909
UniProt:
A0ABR0QR05
LinkDB
All DBs
Position
2:110722412..110728295
Genome browser
AA seq
638 aa
AA seq
DB search
MPSPATIPRRSSSDPDLTVTTSKPKTLIVTPPSSRSSASVSRGKKSSYWISWSNISKLGD
FIDRRKKESDLTEESLHEHNKLHGIYSHKFRLNNFIGDEEVDEKYNKCSPYYKGLTDSTL
RINREKNVSGADSPGRESQTTTVFSTSSSSLSILFGKVQELGSSCFTCTRTGDYYKDPDV
LKPVKATIPSLPVPCSNTTSMKDIKPEIKEAEDNRLDVQLVFKEKPLRERVREPSAAPPT
VTKTVVEKKEAEVNQKFILADKYRPKALKDFICNRSEALRVQDLVKSGEFSHIIFEGPAG
VGKRTMIRAVIREIFGSDRVQTTDECKPYYLKGESVRRMDVNIRESSKHVEVNLSDLKGY
EKHVIVELMKETQPKKPFSYDPQNYKAIVLCEADKLSTDALLYIRWLLLRYKAGNKVFFC
CSDISKLQPIRSLCTVIKLLPPSKQEIVEVVEFIAKQEGIVLPPKFGERIANSSKNNLRQ
AIRSFEACWQSSYPFKEDQIILTGWEEDIANIAKNMVEERSPKQLYIIRGKLQIFIEHDV
SPDFIFMSLVGEVKKHLHENLHPQVDALYDEYNRDDENMIESEDEMGTKVIDPVKKNSRI
FSRIEEFIARFMSWYNNQSKMANAAVNTPLTADEGTSP
NT seq
1917 nt
NT seq
+upstream
nt +downstream
nt
atgccgagtccagctacaatcccccgacgttcctcatcggatccggatctcaccgtcaca
acgtccaaacccaagaccttaatcgttacacctccgtctagtcgttcctcggcgtctgtt
agccgtggtaagaaatcatcttactggattagttggagcaacatcagtaaactaggcgac
ttcatcgaccgacgaaaaaaagagtccgatttaaccgaagagagtctccacgaacataac
aagttgcatggaatatattctcataagtttcgtcttaataatttcattggtgatgaagaa
gtcgatgaaaagtacaataagtgcagcccttattacaaaggcctcactgattcgacactt
aggattaatcgtgaaaagaacgtgtccggagccgatagtcctggtcgagaaagccaaacg
acgaccgttttcagtacgagttcgagctctctttcgattttgttcggtaaagttcaagaa
ctcggttctagttgttttacttgtacaagaactggtgattattacaaggatcctgatgtt
ctcaaacccgttaaagcaactattccttcattaccagtaccatgttctaatacaacttca
atgaaggatataaaaccggagataaaggaggctgaggacaatcgtcttgatgttcaatta
gtttttaaggagaagccattgagggagagagtacgggaaccatcggctgcaccaccgacg
gtaaccaaaaccgttgtcgagaaaaaagaagccgaggtgaatcaaaagttcatattggcg
gataagtaccgacccaaagctttgaaagatttcatctgcaatcgaagtgaagcacttcgg
gtgcaggatctggtgaaaagcggagaatttagtcacattatatttgaaggacctgccggt
gttgggaaaagaactatgataagagctgtaattcgtgaaattttcggatctgatcgagtt
cagaccacggacgagtgcaagccatattatttgaagggggaatcagtaagaagaatggat
gtaaatataagggaatcatccaaacatgtagaagtgaatctttcggatctaaaaggatac
gagaagcatgtgattgtggaactaatgaaggaaacacaacctaaaaaacctttctcatac
gaccctcaaaactataaagcaattgttttatgtgaagcagacaagctaagtacagatgca
ttactgtacattcgatggctgttactaaggtataaagcgggaaataaagttttcttctgc
tgctccgatatctctaagcttcagccgattagatcactttgcactgtcattaagctactt
ccaccttcaaaacaagagattgttgaagtagtggaatttatagcaaagcaagaaggtata
gttttgccacctaagtttggtgaaaggatagctaatagttcaaagaataatctgcgtcaa
gccattcgttcattcgaagcctgttggcaatcaagttatcctttcaaggaagatcagata
atattaacgggatgggaagaagacattgcaaatatagccaagaacatggtggaggagcga
agtccaaaacagctatatatcattcgaggaaagcttcaaattttcattgagcatgatgtg
tctcctgacttcatattcatgtcattggttggagaagtgaaaaagcacttgcatgagaac
ttgcatcctcaagtagatgctttatatgatgaatacaatagggatgatgaaaacatgatt
gagagtgaagatgaaatggggacgaaagttattgatccggtcaaaaagaacagtcggatt
ttctccagaatcgaagagtttatagctagattcatgagctggtacaataatcaatcaaag
atggcaaatgcagcagtcaacacgcccttgaccgccgatgaagggacttcaccctga
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