KEGG   Gossypium arboreum (tree cotton): 108463709
Entry
108463709         CDS       T05776                                 
Name
(RefSeq) tRNA-dihydrouridine(47) synthase [NAD(P)(+)]-like isoform X1
  KO
K05544  tRNA-dihydrouridine synthase 3 [EC:1.3.1.89]
Organism
gab  Gossypium arboreum (tree cotton)
Brite
KEGG Orthology (KO) [BR:gab00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:gab03016]
    108463709
Enzymes [BR:gab01000]
 1. Oxidoreductases
  1.3  Acting on the CH-CH group of donors
   1.3.1  With NAD+ or NADP+ as acceptor
    1.3.1.89  tRNA-dihydrouridine47 synthase [NAD(P)+]
     108463709
Transfer RNA biogenesis [BR:gab03016]
 Eukaryotic type
  tRNA modification factors
   Dihydorouridine synthases
    108463709
SSDB
Motif
Pfam: Dus zf-CCCH_DUS3L zf-CCCH_4 zf_CCCH_4 zf-CCCH_2
Other DBs
NCBI-GeneID: 108463709
NCBI-ProteinID: XP_017619100
UniProt: A0A0B0NUB1
LinkDB
Position
13:complement(46874696..46879236)
AA seq 726 aa
MDDCPKDICAVTDSSTEGVPASQPPLDPNGTTQRSPEELVARAIAPVKREFLRPPPSSRT
TQNSPASDTNVKQPQANVVQEKKSKRQLKRERRQEQNSPLNLCPEIAKTGDVNACSYKDK
CRFSHDIEAFMAQKPADLEGDCPFIKADAPCPYGLACRFAGTHKDNAPIATSNLLKKSSE
VNGLSKDVQKLLWKNKMRFTKADAVVKSLGLAGPNWKVKKLVDKEEDEVGLDGSHAADET
NCKKVVDDSVDCSECPSTFPAAVNAEEACETDELRPLKKAKLVVDEKCSDEGEDATVLEN
DNEKNSAETELADNVLAEPDRSPKICNLKDATVLEKYNEKKSAETELADDVHAEPDKSLK
IHPREKMLIDFREKLYLAPLTTVGNLPFRRVCKTLGADVTCGEMAMCTNLLQGQASEWAL
LRRHSSEDLFGVQICGAYADTVARTVELIEKECTVDFIDINMGCPIDIVVDKGAGSFLLT
KPLRMKGIIQAASGTVDKPITVKVRTGYFGGKNRIDSLIADIGSWGATAVTIHGRSRQQR
YSKLADWDYIYQCARKAPSTLQVLGNGDIFSYLDWNNRKTDSPELSTCMIARGALIKPWL
FTEIKEQRHWDISSQERLNILKEYVRFGLEHWGSDKKGVETTRHFVLEWLSYACRYIPVG
LLDVIPQRLNWRPPSYYGRDDLETLMASDSAADWIRISEMLLGKVPDGFTFAPKHKSNAY
DLAENG
NT seq 2181 nt   +upstreamnt  +downstreamnt
atggatgactgtccgaaagatatctgtgcggttacagactcttcgacggaaggggtcccg
gcttcacagccgcctttggacccgaatggaactactcaacgttcaccggaagagttagta
gctcgagccattgcacctgtaaagcgagagtttcttcgacctccaccatcctctagaacc
acccaaaacagccccgcctctgacaccaacgtcaagcaacctcaggcaaacgttgtccag
gaaaagaaatcgaagcggcaactcaaacgagagcgtcgtcaggagcaaaattctcctttg
aatctatgtcctgagatagcaaagacgggagatgtcaatgcatgttcttataaagataaa
tgtcgtttcagccatgacattgaagcctttatggctcagaaaccggctgatctagagggt
gactgcccatttataaaagctgatgcaccctgcccttatggtttagcctgtagatttgca
ggcacgcataaggataatgctcccattgctacttctaatttattgaagaaaagctctgaa
gtcaatggactaagcaaagatgttcagaagcttttgtggaaaaacaaaatgcgctttact
aaagcggatgctgtagttaaatctcttggactggcggggcccaactggaaagtaaagaag
ctggtagataaggaggaagacgaagttggtttagatggttctcatgctgctgatgagacc
aattgcaaaaaggtggttgatgattcagttgactgttctgagtgtccttcaacatttcca
gcagcagttaatgctgaggaggcatgtgaaactgatgagttgagacccttgaagaaggcc
aagttagtggttgatgaaaagtgctctgatgaaggggaagatgcaactgttttggagaat
gataatgaaaaaaattctgctgaaactgaactggcagataatgtacttgcagaacctgat
aggagccccaagatatgtaatttgaaagatgcgactgttcttgagaagtataatgaaaaa
aaatctgctgaaactgaactggctgatgatgtacatgcagaacctgataagagcctcaag
atacaccctcgtgaaaagatgcttattgattttagagagaagttgtatcttgctcctcta
accacagttgggaatcttccttttcgtagggtttgcaaaacactgggagcagatgtgaca
tgcggtgaaatggcaatgtgcaccaaccttttgcagggtcaagcttcagaatgggctctg
ctgaggcgacattcatccgaggatttgtttggagtccagatatgtggggcatatgctgac
actgtagcacgtactgttgaacttatagaaaaggagtgtacggtggacttcattgacatt
aatatggggtgtccaattgatattgttgttgataagggtgctggatcttttcttctcaca
aaaccattacgtatgaaaggaatcattcaagcagcttctggcactgtagataagcctata
actgttaaggtgagaacgggttattttggaggtaaaaaccgcattgattcgctaattgca
gatattggcagttggggtgctactgcagtgacaatacatggtcgatcacgtcagcaacgc
tacagtaaacttgctgattgggattatatataccagtgtgctcggaaggcccctagcaca
ttacaagttttgggtaatggagatattttctcatatttagattggaacaatcgtaaaact
gacagccctgagctttctacgtgtatgattgctcgaggggcattgattaagccttggtta
tttactgaaatcaaggaacagaggcactgggatatcagttctcaggagcggttgaatatt
ctgaaggagtatgtacgttttggcctagagcattggggatctgacaaaaagggtgtggaa
acaactaggcattttgtgttggaatggcttagctacgcatgtaggtatattcctgttggt
cttttagatgtcatcccccaacgtctgaattggcgacctccttcatactatggacgagat
gatcttgagacgctaatggcttctgattctgcagctgactggatccgtatatctgaaatg
ctgcttggcaaggttccagatggtttcacattcgcaccaaagcacaaatccaatgcttat
gatcttgcagaaaatggctaa

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