Gossypium arboreum (tree cotton): 108463748
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Entry
108463748 CDS
T05776
Name
(RefSeq) piezo-type mechanosensitive ion channel homolog
KO
K22128
piezo-type mechanosensitive ion channel component 1/2
Organism
gab
Gossypium arboreum (tree cotton)
Brite
KEGG Orthology (KO) [BR:
gab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gab04131
]
108463748
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
gab04040
]
108463748
Membrane trafficking [BR:
gab04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
Others
108463748
Ion channels [BR:
gab04040
]
Other channels
Mechanosensitive channel (Piezo)
108463748
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Piezo_THU9_anchor
Piezo_cap
THU_Piezo1
DSPn
DZR_2
Piezo_TM25-28
Zn_ribbon_15
Motif
Other DBs
NCBI-GeneID:
108463748
NCBI-ProteinID:
XP_017619142
LinkDB
All DBs
Position
13:complement(89819620..89837966)
Genome browser
AA seq
2469 aa
AA seq
DB search
MGKFLIGFVLPQLLLTAALLNRSLISLVDLLTFLLIQYAAPEIGFQFPRQSLLSWYTLIF
SSLTILSHAIFYIVWVVKGDQWSISDAQWAKLIGFVRDQSSSFPSLIYFLMVQVLAALVA
LFEISGSRFGLDSQSDSFWGHLYSFVLQIGSHLRVLCCLLLPAVQLIVGISHPSWASLPF
FICSSIGLVDWSLTSNFLGLFRSWRYLLLYAGLNIVLLYIYQLPVEYYGIFKWLADFIGL
YKISAKSEWSEICSGLSLIVFYIILSWIRCDLMEMDFIMSARASSLTRQLLPSKHSFFIR
ESRSGVRHTNILLRGPILRTFGINYFTYGFPISLLALSFWSFHFASLYAFGLLAYVGYIL
YVFPSMYHLHRLNGLLLVLILLWAVSTYIFNIAFTVLNKEKWQDMEIWETIGLWHYPIPG
FYLLAQFSLGVLVALSNLVNNSVFLYLSDRDGPSSSDDSSLDDTEETKVLIVATIVYGLR
KSSRAMVLMLLFLIALNPGLIPALYMAFFLIFLLSHHVGTKIRQCLILLCEAHFTLLYLL
QLNLISSTLEKKGSIAEKILSQLGSFNHAKSGDFLKIAVLACFSAIHNHGFEMLLSFSAI
VQHTPCPPIGFTILRAGLLKSVILTVYTSKSRNPPEINFSHERKIGSYLNTIGKTFLSTY
RSCGTYIVFLTILLTVYVVTPNYSSFGYLFFLLMWITERQLVGKTVKRLWLPLKVYAIAV
FVFIYGLSAFSWLQEWLSRLVKLSSAFGYNPEASMLKNIWESLAVLVVMQLHRYERRQSK
NFAPRDDVPETDAFTFLKRLLIWHSEKILYLTIFYASLSPISAFGFSYLFGLVICAISSK
NSQIPSKLFLVYSASLVMIEYPFQMWGYQAEMFPGQKHHSVSFFLGLQVYEPGFFGVEFG
LRGKVLVIVACILQHSVSQWFEKMPSNFENEGWWEDSCGLFMSTEIASNGDMNFTRGRKC
LDANPLLRKMKKPRSYSCPSLKTIILGGMNPAGGSEGRNHTNGHLQESSNDNHKWKRKQI
HMLRKERLEMQKASLKVYIKFWVENMFNLFGLEINMIALLLASFSVLNAISLLYIASLAA
CILLHRDAINKLWLIFVFLFASIFTLEYMAFLLNLTSWMHLSPTRAKALCNDCWRSSHIH
FDYCKKCWLGFIVDEPRMLISYYTVFMFSCLKLHADRLSSLSGFQTYKEMMLHSKQVSGL
SDLSFETKVLWTFLDYLRLYSYCHLLDLVLALILITGTLEYDVLHLGYLGFALVFFRIRL
QILKKKNSIFKFLRIYNFALIVLSLAYQSPFVGDFCEGKCEMIDRISKVIGLHKYGFHVT
SRFALVEVIIFILVSLQSYMFSSLEFDYVSKYLEAEKISALVREQEKRAAWKTAHLQHIR
KSEEQKRMRNLQVEKIKSEMLNLLIQLHSLSTTNCGSTFPEGKIKRNRNLSVNSNPSQTT
PKKWDADLERKDLSGRLDLLSNHDMNGSPRSERTVVLCEEDSRQQSVNSLFEIDELHETV
NGNMYSHTKPQEKYQSKRSPLASAVQLIGDGVSQVQSLGSMAVMNLASLLNIEHEKLDSY
DHSSDDEVFYEVENHDFGGEHIERTHSMLSDSDRNMFNVARRQIKIIFHHIWDQMRSNNN
VVCYCCFILIFLWNFSLLSMVYLVGLFLYALCVNTGPSHMFWVIMLIYTEVCILLQYLYQ
IIIQHFGMIFKAGLFRELGFPACKNMSSFVISHWPLFLVYLFTLLQYAITSSEGEWTVTA
EFSFTRKNHHQEIAAYDFGFFRRLKGLLLHLRNVMEVLIRNLYRYWISLTQESETPPYFV
QLSMEVNLPPGDGIQPEMIESKMNKLLKIMHDRRCRDNLNIYPASRVRVQSIERSPENDN
ISLVVFEVLYASPSGDSSFKEGQRSLTPSADVTSEILEAYHADIFREIRFPYTILSVIGG
GKKDIDLYAYVFCADLVVFFLVAIFYQSVIKNNSEFLEVYQHEDQFPKEFVFILMVIFFL
IVLDRVIYLCSFATAKVIFYLFTLLLFTYSVTNYSWQMEPSDKHAGKFALRAIYLTKLIS
LALQAIQIRFGIPNESNLYRQFLTSSISQTNFLGFRIYRALPFLYELRCVLDWSCTTTSL
TMYDWLKLEDIHGSLFLVKCDADLNRAKHQQGKKQTKLTKFCSGICLFFILICVIWAPML
MYSSGNPTNIANPIREASVQIDIKTSSGRLTLFETTLCERISWNKVKHEHIDLDPQGYLD
NYNEVDIQLICCQPDASKVWLVPPVVQARFIDSLQQSMDIVFSWQFRRDRPKGKEVVKHQ
LLVADHDLPKSAEVMQVLNGTANSFRMFNIYPRYFRVTGSGDLRFLEQSVEKVSGDLVLN
HGNPEWWSFQDIDASSGTGCCEFAGPVAIIVSEETPQGILGDTLSKFSIWGLYITFVLAV
GRFIRLQCSDLRMRIQVENLPSCDRLLAICEDIYAARAEGELEVEEVLYWTLVSIYRSPH
MLLEYTKPD
NT seq
7410 nt
NT seq
+upstream
nt +downstream
nt
atggggaagttcctcattggatttgtattgcctcagcttcttttgacagctgctttgctg
aatcggagtttgatatctctggttgatctgttaacctttctcctcattcaatatgcagct
ccagaaataggttttcagttcccaaggcaatctctcttatcatggtacacacttatcttt
tcgtcactaactattctgtcacatgccatattttacattgtttgggttgtgaaaggagac
cagtggagcatttctgatgctcaatgggcaaagctaatcggttttgtaagagatcagtct
tcgagctttccatctttaatatatttcttgatggtacaagtactagcagctttagttgcg
ttatttgaaataagcggcagtaggtttggcttggattcacagagtgattcattttggggg
catttatattcctttgtactacaaataggttcccatctaagggttttatgctgcttattg
ttgcctgctgtacaacttattgttggaattagtcatccctcttgggcatctttaccattt
tttatttgtagtagtattggacttgttgattggtctttaacaagcaactttcttggcctt
ttcagatcttggcggtaccttttgttgtatgctggcttgaacattgtcttactctacata
taccaactccctgtcgagtattatgggatctttaagtggctagctgattttattggactc
tataagatatctgctaaatcggagtggtcagaaatttgttctggtctttctcttatagtc
ttttacatcattctatcttggattagatgtgatcttatggaaatggatttcatcatgtcg
gcaagagcaagcagcttgactaggcaacttcttccttcaaagcattcattctttattcgt
gaatcaagatccggtgttaggcacactaatattttgttaagaggaccaatcttacggact
ttcggcattaactattttacttatggttttccgatttccttgcttgctctttccttttgg
agtttccactttgcgagtctctatgcatttggacttcttgcgtatgttggctatattctg
tatgtcttcccctcaatgtatcacttgcatcgattgaatggcttgctacttgttttgatt
ctcttgtgggctgttagcacatacatcttcaacatagctttcacagtccttaataaggag
aaatggcaggacatggagatttgggaaacaattgggctatggcactaccctatccccgga
ttttatctattggcacaatttagccttggggttcttgttgcattgagtaatcttgttaac
aattccgttttcctgtacttgtctgacagagatgggccatcttctagtgatgattcctct
ttagatgacacagaggaaacaaaagtactgattgtagctaccatagtatacggactgcgc
aaaagttctcgggctatggtgctgatgctgttgttccttattgcgttaaaccctggcctc
atccctgccttatacatggcttttttcttgatatttctattaagccaccatgtaggtaca
aaaatacggcaatgcttaattctgttatgcgaggcacatttcacactgttatatcttctt
cagcttaatcttatatcttctaccttggagaaaaaaggctcgattgctgagaaaattctt
tcacaactaggttcgtttaatcatgctaagtctggggacttcctgaagatagctgtgctt
gcttgcttttctgccattcataatcatgggtttgaaatgttgctctcattttcagcaatt
gttcaacacactccttgccctccgatagggtttaccatcttgagagctggtttgctcaag
tctgttatattgacggtttatacctcaaaatcaagaaacccccctgaaattaacttctct
catgagagaaaaataggatcatatctgaatactattggcaagacgtttctttcgacatac
cgatcatgtggaacttacattgtctttctcacgatccttcttacagtttatgtagtaacg
cctaactattcttcatttggttacctattcttccttctaatgtggattaccgaaagacaa
ctcgtagggaagacagtaaagcgcctttggctaccgctgaaagtttatgccattgcagtg
tttgtgttcatttacgggttaagtgcgttctcttggcttcaggaatggttgtccagatta
gttaaactttcttctgccttcgggtataacccagaagcttcaatgttgaaaaacatttgg
gagtccttagctgtattagttgtgatgcaactacatcgttacgagaggaggcaaagcaaa
aacttcgcaccgagggatgatgtgccagaaactgatgcttttacttttctcaagcgcctt
ctaatttggcacagtgaaaagatactgtatcttaccatattttatgcatctttgtcaccg
atcagtgcatttgggttttcctatcttttcggtttagttatttgtgccatttcatcgaaa
aactctcagatcccttcaaaactctttctggtttattcggcatcacttgtgatgattgaa
taccctttccagatgtggggttaccaggctgagatgttccctggtcaaaaacaccattcg
gtttcattttttctcggcttgcaggtgtatgaacccggtttcttcggtgtagaatttggc
ttgagagggaaggtgctagttattgttgcgtgcattctgcagcacagtgtctctcagtgg
tttgaaaagatgccgagcaactttgaaaatgaaggatggtgggaggactcttgtggtttg
tttatgtcaactgaaatagcctcaaatggtgacatgaattttaccagaggaagaaaatgt
ttagatgccaatccgctgttaagaaaaatgaaaaagccaagaagctattcgtgcccatct
cttaagactatcattttaggaggtatgaatcctgcaggaggcagtgaaggtagaaaccat
acgaatgggcatttgcaggaaagttccaatgataatcataaatggaagagaaagcaaatt
catatgttgagaaaggagaggctggaaatgcaaaaggctagtctgaaagtttatatcaag
ttctgggtagagaatatgtttaatctcttcggcctcgagataaacatgatcgcattgctt
cttgccagcttttctgtgctgaatgctatatctttgctctacattgcatctcttgcagct
tgcattcttttacatcgggacgccataaataaactgtggctaatatttgttttcttgttt
gcttccattttcaccctcgagtacatggcttttttgttgaatctgacttcctggatgcat
ctttccccaactagggccaaagcgctttgcaatgactgttggagaagctcccatattcat
tttgattactgcaagaaatgctggctaggtttcatagtagatgaacccagaatgcttatc
agctattacacagttttcatgttttcatgtctcaaacttcatgcggatcgcttgtcgagt
ctctcagggtttcagacatataaagaaatgatgcttcactcaaaacaagtatccggtctg
agtgatctctcgtttgaaacaaaagtcttgtggacatttcttgactacctaaggctttac
agttattgtcacttactggatcttgtgcttgctttaattttaatcactggaacactagag
tatgatgttcttcaccttggataccttggatttgctctagttttcttccggattaggctt
caaattctaaagaaaaagaatagcatcttcaaattcttgcggatttacaattttgctctg
attgtccttagtcttgcataccagtctccttttgtaggtgatttttgtgaggggaaatgt
gagatgatagatcggattagcaaagtgatcgggttgcataaatacggatttcatgttaca
tctagatttgcacttgttgaggttataatattcattctggtttcacttcagtcatacatg
ttttcatccttggaatttgactatgtatcgaaatatcttgaagcggaaaagatcagtgct
ttagtccgtgagcaggagaagagggctgcatggaagactgcacatttgcaacatatacgt
aaatccgaggagcaaaagcgcatgcgtaatctacaagttgaaaagatcaaatcagagatg
ctcaacttgctgatccaacttcatagcttgagcaccactaattgcggtagcacctttcct
gaaggcaaaatcaaaagaaacaggaacctttcggtaaattcaaatccatctcagactacc
cccaaaaaatgggatgctgatttagagagaaaggatcttagtggaagattggatttgtta
tctaatcatgatatgaatggatctcctagaagtgaaagaactgtagttctttgtgaagag
gactccagacagcagtcagtcaattcactgttcgagattgatgaactacacgagacagtt
aatgggaacatgtattcccatacaaagcctcaagaaaaataccaatccaagagaagtcca
ctagcatcagcagtacaactgataggtgatggagtttcacaggtgcagtctcttggtagt
atggcagtcatgaatctcgcaagcctcttaaacattgaacatgaaaaactggattcatac
gatcattcttcagatgatgaggtattttacgaggtagagaatcatgattttggtggtgaa
catattgaacgaacgcattcaatgctatctgatagtgataggaacatgtttaatgttgcg
cgccgacaaatcaagatcatcttccaccatatttgggaccaaatgagatcaaataacaat
gttgtttgctactgttgctttattctgattttcctatggaattttagcctgctttccatg
gtttatctagttggtctcttcttgtatgctctatgtgtaaataccggtccgagccacatg
ttctgggttattatgctaatttacactgaggtctgtattttgcttcaatacttatatcaa
atcatcattcaacattttgggatgattttcaaagccggattgtttcgggagttgggattt
ccggcgtgcaagaacatgtcatcttttgtgatcagccattggcctctttttttagtgtat
ttgtttactctcttacagtatgccataacttccagcgaaggcgaatggactgtgacagct
gagttcagctttactagaaaaaatcaccaccaggaaattgctgcatatgattttggattc
tttaggagattaaagggactgcttttacatttaagaaacgtgatggaagtgttgattcga
aatctttacaggtactggatatccttaacacaggaatccgaaactcctccttactttgtg
cagctatctatggaagtcaacttaccaccaggggatggcattcaacctgagatgattgaa
tcgaaaatgaacaagttgctgaagatcatgcatgacagaagatgcagagacaacctcaac
atttatcctgcaagtagagttcgagttcaaagcattgagcgaagtccagaaaatgataac
atttccctggttgtttttgaggtgttatatgcctccccttcaggagattcttccttcaaa
gaagggcaaaggtcgttaaccccgtctgctgatgtaactagtgagattctagaagcctac
catgccgatatttttagagaaatacggttcccttacactatactttctgtaatcggtgga
ggtaagaaagatatagatctatacgcctatgtattttgtgcagatctagttgtcttcttc
ttggtggcaattttctaccaatctgtcataaaaaataacagtgagttccttgaagtttat
cagcatgaagatcaattcccaaaagagttcgtgtttatcttaatggttatctttttcttg
atagtgctggatcgcgtcatttacctttgttcatttgccactgcgaaagttatattctat
cttttcactcttttgctcttcacatactctgtcacgaactattcttggcaaatggagcct
tcggacaaacatgccggaaagtttgcgcttcgtgctatttacctcacgaagctgatttcc
ctggctctgcaggccatacaaatccgatttgggattccaaatgaaagcaatctgtacagg
caattcttaacaagtagcatttctcaaactaatttcttgggtttccgaatttatcgtgct
ctccctttcctttatgaacttcgatgtgttcttgattggtcttgcacaactacatcttta
accatgtatgattggttgaagttggaagatatccatggaagcttgtttcttgtcaaatgt
gatgcggatctaaatagagctaaacaccagcaaggaaaaaagcagacaaagctaactaaa
ttttgcagtggcatttgcttattcttcatactgatttgtgtcatatgggcccctatgctg
atgtacagcagtggtaacccgacaaatattgcaaaccccataagagaagccagtgtgcag
attgatataaagacgagcagcggaaggcttacattgtttgagaccactttgtgcgaaagg
atctcatggaacaaagtaaaacacgaacatatcgatcttgatccacaaggctacttagac
aattataatgaagtggacattcaactgatatgttgccaacctgatgcaagcaaagtatgg
cttgttcccccagtggtccaagcccgatttatcgattctctccaacagagcatggacata
gttttctcttggcaattcaggagagatagaccgaaagggaaggaagttgtgaaacatcaa
ttacttgttgctgatcatgatcttcctaaatctgcagaagtgatgcaagttcttaatggt
actgctaatagtttcagaatgtttaacatctatccaagatatttccgggttactggttct
ggagatttgcggtttctcgaacagtcggttgaaaaggttagtggggatcttgttctcaat
catggaaatccagaatggtggtcttttcaggatattgatgcatcaagtggaactggatgc
tgtgagtttgctggaccagtggccataattgtatccgaggaaacaccgcagggcattctt
ggggatacattgagcaaatttagcatttggggtctttacattacttttgtgctagctgtt
ggccgtttcatcagactacaatgttctgatctcagaatgagaatacaagttgagaacctt
ccttcttgtgacaggttgcttgcaatctgtgaggacatatatgctgcaagagctgagggt
gagcttgaggttgaagaggttctttactggacactggtcagcatttatcgatctccacac
atgctgctcgagtacactaagcctgactaa
DBGET
integrated database retrieval system
