Gossypium arboreum (tree cotton): 108463820
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Entry
108463820 CDS
T05776
Name
(RefSeq) auxin response factor 5-like isoform X1
KO
K14486
auxin response factor
Organism
gab
Gossypium arboreum (tree cotton)
Pathway
gab04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
gab00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
108463820
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Motif
Pfam:
Auxin_resp
B3
AUX_IAA
Motif
Other DBs
NCBI-GeneID:
108463820
NCBI-ProteinID:
XP_017619239
UniProt:
A0A0B0Q0F7
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Position
1:complement(100669318..100675361)
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AA seq
950 aa
AA seq
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MGSVVEEKIKQGGLVNVGAQSTLLEEMKLLKEMQDQSGSSFVGTRKAINSELWHACAGPL
VSLPQVGSLVYYFPQGHSEQVAVSTKRMATSQIPNYPNLPSQLMCQVHNVTLHADRDTDE
IYAQMSLQPVNSEKDVFPIPDFGLKLSKHPNEFFCKTLTASDTSTHGGFSVPRRAAEKLF
PSLDYSMQPPTQELVVRDLHDNTWTFRHIYRGQPKRHLLTTGWSLFVGSKRLRAGDSVLF
IRDEKSQLLVGVRRANRQQTTLPSSVLSADSMHIGVLAAAAHAAANRSPFTIFYNPRACP
SEFVIPLPRYRKSVYGSQVSVGMRFGMMFETEESGKRRYMGTIVGISDLDPLRWPGSKWR
NLQVEWDEPGCNDKQNRVSAWEIETPESLFIFPSLTSSLKRPLYPGFSGAESEWGSLMKR
PLLQFPENGNGNLPYSMSNLCSEQLMKMMLKPQLVNHPGIFASPLQQIADVKIPPLEEMK
NLQSKSHPKPQVIQSENMLIENQNLSHPVPDHPDPITSNMSKINANGNPHPANILTQAGT
GSSNEKLKLESKHSAEQLTSTSECNEEKLVASTVNTTMSNQLSFPTQPQIPLHVQNNPWS
IQSQLDSSVLQAHQMLVSQADISTLNSFLPFSDTDEWTSNLSSCQPLSGAYKSPGPIPMV
GLQDSSAVFPVETDDSLTTVGEEIWDPKLNSCRVSSQADQLASFTQQDPCSLNSGGVRDL
SDDSNNQSGIYSSCLNIDVSNGCSTVIDPFVSSAILDEFCSLKDADFQNPSDCLVGNFGS
CQDVQSQITSASLADSQAFSRQDLPDSSGGNIDFDDSGLLQNNSWKQTAPRVRTYTKVQK
AGSVGRSIDVTSFKNYDELISAIECMFGLKGLLDDPRGSGWKLVYVDYENDVLLVGDDPW
EEFVGCVRCIRILSPTEVQQMSEEGMKLLNSAATVQGINGSNSDGSNANA
NT seq
2853 nt
NT seq
+upstream
nt +downstream
nt
atgggttctgtcgttgaagagaagatcaaacaaggaggtttggttaatgtaggtgcacag
tccactctgcttgaggaaatgaagctattgaaagaaatgcaagatcaatctggttcgtcc
tttgttggtacccgtaaggctataaattccgagttatggcatgcctgtgctggtccactt
gtttccttgcctcaggtgggaagtcttgtgtattactttcctcaaggacatagcgaacag
gtagcagtgtccactaaaagaatggcgacttctcaaattcccaactacccaaatcttcca
tctcagttaatgtgccaagttcataacgttacattacatgcagacagagacaccgacgaa
atatatgcccaaatgagtcttcaaccagtgaactctgaaaaagatgtgttccctatacca
gacttcggattgaagctgagcaagcatcctaatgaatttttctgcaaaactttgactgca
agtgatacaagtacacacggtggtttttcagtgccacgtagagcagctgagaagctcttt
ccttcattggattattccatgcaacctccaacgcaagagcttgttgtgagagatttgcat
gataacacctggacgtttcgtcatatataccgtgggcagccgaagcgacaccttcttact
acagggtggagtttgtttgtaggatcaaaaagacttagagctggtgattccgttctcttt
atcagggatgagaaatcacagttattggtgggtgtaaggcgggctaatcgtcaacaaacc
acattgccatcatctgttctatctgctgatagtatgcacattggtgtccttgctgccgcc
gctcatgctgctgccaatagaagtccattcacaattttctacaatccaagagcatgccct
tcagaatttgtcatccctttgcctagataccgtaaatctgtatatgggtctcaagtctca
gtcggtatgaggtttggaatgatgttcgaaacggaggagtccgggaaacgtagatatatg
ggtacaatagttggtattagcgacttggatcctctaagatggcctggctcaaagtggcga
aaccttcaggttgaatgggatgaacctggatgtaatgataaacagaatagggtgagcgca
tgggaaattgaaactcctgaaagcctctttatttttccttcgttaacttcaagtctgaag
cgaccattgtatcctggattttcaggagcagaatctgaatggggaagcttgatgaaaagg
cccctactccagtttcctgaaaatggaaatgggaatcttccctattcaatgtcaaattta
tgttccgaacaattgatgaagatgatgttgaagcctcagcttgttaaccatcctggaatt
tttgcttcccccttacaacaaatcgctgatgtaaagatacctccattagaagaaatgaag
aacttgcagtctaaaagccacccaaaaccccaggttatccaatcagaaaatatgttgata
gagaaccaaaatctttcccacccagtccctgaccatcctgatcccataacttcaaatatg
tccaaaatcaatgctaatgggaacccacatcctgcaaatattctaacacaagctgggact
gggagcagtaatgaaaaattaaagttggaatcaaagcattcagccgagcaactgacttcg
acatcggaatgcaatgaggaaaaattggtggcaagtactgtaaacacaactatgtcgaac
caactttctttccctacccagccccagatcccactccatgtgcaaaataatccctggtcg
attcagtcacaattggattcatcagtcctccaagctcatcaaatgcttgtatcccaagct
gatattagtactttaaacagctttcttcctttctcagacaccgatgagtggacgtcaaat
ctttcttcttgccaacctctttctggggcgtacaaatcacctggtccgataccaatggtt
gggttacaggactcttcagctgtctttccagttgaaactgatgattcgttaactacggtg
ggtgaggaaatatgggatccaaagctgaatagttgcagagtttcatcccaagcagaccaa
ttggcttcattcactcagcaagatccatgcagtcttaattctggtggggtaagggatttg
tctgatgacagcaacaatcaaagtgggatatatagtagctgtcttaacattgatgttagc
aatggttgcagcaccgtgattgatccttttgtttccagtgccattctagatgagttttgc
tcattgaaagatgctgattttcaaaacccttcagattgtttggtcgggaactttggttct
tgtcaggatgttcagtctcagattacctctgctagccttgcagattctcaagctttctct
cgacaagacttgcctgacagctccggtggcaatatcgattttgatgacagtggtcttctg
caaaacaattcctggaagcaaacagctccacgcgttagaacatatacaaaggttcagaag
gcaggatctgtaggaaggtcgattgatgttacgagttttaagaattacgatgaactaatc
tctgcaatagaatgcatgtttggactcaagggtctgctggatgatcccagaggttcaggc
tggaaattggtgtatgtggattatgagaatgatgttcttctcgttggagacgatccttgg
gaggaatttgtcgggtgtgttcgttgcatccgaattctatcccctacagaagtacaacag
atgagtgaagaaggaatgaagcttctcaacagtgctgccacagtgcaaggcatcaatggc
tctaactcagatggttccaatgcaaatgcttaa
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