Gossypium arboreum (tree cotton): 108463829
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Entry
108463829 CDS
T05776
Name
(RefSeq) uncharacterized protein LOC108463829 isoform X1
KO
K11671
nuclear factor related to kappa-B-binding protein
Organism
gab
Gossypium arboreum (tree cotton)
Pathway
gab03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
gab00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
108463829
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
gab03036
]
108463829
Chromosome and associated proteins [BR:
gab03036
]
Eukaryotic type
Chromatin remodeling factors
INO80 complex
108463829
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
108463829
NCBI-ProteinID:
XP_017619250
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Position
1:6747454..6752764
Genome browser
AA seq
1373 aa
AA seq
DB search
MMAIEKSNSKVSPFDSEFSPGSREMTVSGDEDELQRPGSAVDSDDEFDDDADSGAGSDDF
DLLELGETGAEFCQVGNSTCLVPFELYDLPGLEDILSLDVWNECLSDEERFSLTKFLPDM
DQDTFMRTLIDIFKGNNLHFGSPIKSLFDMLKGGLCEPRVALYREGMNFFRKRQHYHHLR
KHQNTMVVNLIQMRDAWLNCRGYSIEERLRVLNIMRSQNSLMYEKLEDKDSASSDGEDLV
DGFWSKRVKDWKAPQKSGRYSGFGVEPDLEFASRGQLMDLEPSKYRKQNPKGKLKTGESK
LPFAREFGSRFSPDLDMNSEPYGLPGTLPREKYESAALRARDWMRLDDAEDPMFGTGIQR
NQNALDNSFMGKSGSSRARKKYNLLRGEELATDSFTASPLSSKHDFLSYGRNRNANQLSE
AKVYASKPPNMRISHDFAKKSKRFKNDPLFAAGDQIKSIKGRIPSLPLQGSRVDLSERTE
LFWQNENQGEDFSVDLSVRPDDWNIKHKKWKTLRESPDLSFKSYKASSPLMSDQFLKSAS
RKKPSQEKIRGNYLQNGGAVMAISKGSRAFIKNEETESDSSEQFDDEEESNPLMRGKLAY
TSGVIENPRLSSLNSGLDSKKTKSSKKYTMKDGWPLDGMNRYSKKSFEENVHVAGVESYY
SERKQKGKMHESSPLPNSGSRVLDEVGGKQVSKLVKNGHLRGEPGDRLRRSSLRAYPTEK
RQNGELAYDHFMTQSNNQHDYLDEEDGSPVALSLADEFNLGRTGKKRQNTEAYDRCEKSE
VSLLGSNKVTKKKKGKRYVEDVNGRGEDGNVQPNSQQQTDDSPFLKKKGKRKFEVDTVTS
DMEPSEPHGADLGTTDLEMETKPQKKPFTLITPTIHTGFSFSIIHLLSAVRMAMITPFPE
DSLEVGKPREEQNGKQQGDLNGVLSCDNTVTNNSDHLVQPSVPFLTVHDIVNRVAVNPGD
PCILEAEEPLQDLVRGVLKIFSSKTAPLGAKGWKVLVAYEKSTKSWSWVGPAMHSSNNVE
TTEEVISPEAWGLPHKMLVKLVDSFANWLKNGQETLQQIGSLPAPPLELMQVNLDEKERF
RDLKAQKSLNTISSSSEEVRAYFRREELLRYSIPDRAFSYTAADGKKSIVAPLRRCGGKP
TSKARDHFMLKRDRPPHVTILCLVRDAAARLPGSIGTRADVCTLIRDSQYVVEEVSDAQV
NQIVSGALDRLHYERDPCVQFDGERKLWVYLHREREEEDFEDDGTSSTKKWKRPKKDTAE
QSDQVAVTVAFHDTGDQSGFELGSELNVEPSCIYSDKKMECCDRQNAEDNADSSHGSEQC
TSQQDHPMTLEPPDLNPVQDGELQCQENSTNEDIDDIDDGREKPVEHLDASLL
NT seq
4122 nt
NT seq
+upstream
nt +downstream
nt
atgatggcgattgagaagagtaattccaaagtttcaccctttgattcggagttttcgcct
ggtagtagagagatgactgtgtcaggtgatgaggacgagcttcaacgtccagggtcagcc
gttgattctgatgatgaatttgacgatgatgctgattcaggagcaggttcggatgacttt
gatttgttggaattaggtgaaaccggggctgaattttgccaagtcgggaactcgacctgt
ttggttccttttgagttatatgatcttcctggattggaagatattttgtctcttgatgtg
tggaatgaatgtttaagtgatgaagagaggtttagccttactaagtttttacctgatatg
gatcaggatacgtttatgcggaccttgatcgacatttttaagggtaataatcttcacttt
gggagtcctattaagagtttgtttgatatgttgaaaggagggttgtgtgagccgagggtt
gcactttatagggagggcatgaatttctttcggaagcggcagcattaccatcatctgagg
aagcatcagaatactatggttgtcaatcttattcaaatgagggatgcttggcttaattgt
aggggatacagtattgaggagcggcttcgtgttttgaatattatgagaagtcaaaatagt
ttgatgtatgagaagttggaagataaggattctgcatcctctgatggagaggatttggtt
gatggtttttggagcaaaagagttaaggactggaaagctccacagaaatcaggtcgctac
tctggctttggggttgaaccagatttagagtttgcatcgcgaggacaactgatggatttg
gaaccatcaaaatacaggaagcagaatccaaaaggcaaactgaagacaggtgagtcaaaa
cttccttttgcaagagagtttggcagccgcttttcccctgatttagatatgaattctgag
ccatacggtttgccaggaacacttcctcgagagaaatatgagtctgcagcactcagggca
agggattggatgaggttagatgatgctgaagacccaatgtttggaacaggtattcagcga
aaccaaaatgctctcgataatagcttcatgggcaaatctggttcttcgagagcaaggaag
aagtacaatcttttaagaggggaagaattagccactgatagtttcacggcttcgcctttg
tcttcaaagcatgatttcctttcctatggtaggaataggaatgcgaatcaattgtccgag
gcaaaagtgtatgcttcaaagcctcctaatatgagaatatctcatgattttgccaaaaag
tccaagcgtttcaaaaacgacccactatttgcagccggagatcaaataaagtctataaaa
ggccgaattccttcgctgccattgcaagggagtcgagttgacttatctgagcgcactgaa
ctgttttggcaaaatgaaaaccaaggagaagatttctctgtggatttgtccgttagacct
gatgattggaatattaagcacaagaaatggaaaacactgcgggaatctcctgatctcagt
tttaaatcttataaagcttcctcaccactgatgagtgaccaattcttgaaatctgccagt
agaaagaaaccatcgcaggagaagattagagggaactatttgcaaaatggaggagcagtt
atggccatttcaaaaggtagtagagcatttattaaaaacgaagaaacagaatctgactca
tctgagcaatttgatgatgaggaggagagcaatcctctaatgagaggcaagttggcatac
accagtggcgtcatagaaaatcctcgcctgtcttcattgaattctggccttgattctaag
aagaccaaatcttcaaagaaatatactatgaaggatggatggcctcttgatggaatgaac
cgctactccaaaaagagctttgaggaaaatgtgcacgtggcaggagtagaaagctactat
tcggaaagaaaacagaagggtaagatgcatgaaagcagtcccttacctaactctggttct
agagttttggatgaggttggtgggaaacaagtttccaagttggtcaagaatggccattta
cgaggggaacctggtgacaggttacgtaggtcctcattgagggcctaccctactgagaaa
aggcagaacggtgaacttgcctatgatcattttatgactcagtcaaataatcagcatgat
tatcttgatgaggaggatggttcgcctgtggcactatcattggcagatgaatttaacctg
ggtagaactgggaagaaaagacagaacactgaagcatatgatcgctgtgagaagtctgaa
gtttcgttgctagggagcaacaaagtgacaaagaagaagaaagggaagaggtacgtggaa
gatgtcaacggaagaggtgaagatggcaacgtgcagcctaactcccagcagcaaactgat
gattctcctttcttgaagaaaaagggaaaacggaaattcgaggttgatacagttacttca
gatatggaaccttctgagcctcatggtgcagatctgggaaccacagatttggagatggaa
accaaaccacagaaaaagccatttactttgattacccctaccattcatactggattctca
ttctcaattatacatcttctttctgcagttcgtatggcaatgattactccatttccagaa
gattccttagaggttggtaaacctagagaggagcagaatggaaagcagcaaggtgatctg
aatggggttctctcatgtgacaacacagttaccaataattcagaccatcttgtgcaacca
agtgtgccttttcttaccgttcatgatattgttaatcgtgtggcagtaaatcctggagat
ccgtgtatccttgaggcagaagagccgcttcaagatttagttcggggagttctaaagatt
ttctcatcaaaaacagcacctttgggagcaaaaggttggaaggtacttgttgcctatgag
aagtccacaaaaagctggtcttgggttggccctgctatgcatagctcaaacaatgttgag
acgaccgaggaggtgatatcacccgaagcctggggtcttcctcacaaaatgcttgtcaag
ttggttgattcttttgcaaattggctaaaaaatggtcaagagactctccaacaaatagga
agtcttcctgcacctccgcttgaactgatgcaagtcaacttagatgagaaagaaaggttc
agagacctaaaagctcagaaaagccttaacaccattagctcaagttctgaagaagtgaga
gcttatttccgtagggaggagcttcttaggtattctattcctgacagggccttctcttac
acagctgctgatggaaaaaaatctatagttgctcccttgaggagatgtggaggtaagcca
acttcaaaggctcgagaccattttatgctgaaacgtgatcggccaccgcatgttacgatt
ctttgtcttgtgagagatgctgctgccaggttgcctggaagtattggcacacgtgcagat
gtttgtactttgataagagactctcagtacgtcgttgaagaagtttctgatgcacaagta
aaccagattgttagtggagccttagaccgcttgcactatgaacgtgatccttgtgtacaa
tttgatggagagaggaaattgtgggtttatttgcatagagaaagagaagaagaagatttt
gaggatgatggtacttcatctactaagaaatggaagaggccgaaaaaggatactgctgag
caatccgatcaagtagctgtaacagtggcttttcatgacactggggatcagtcgggattt
gaattaggctctgagcttaatgttgaaccttcatgcatttacagtgataaaaagatggag
tgttgtgatagacaaaacgcggaggataatgctgactctagtcatgggtctgagcaatgt
accagtcagcaggatcatccaatgacattggagcctcctgacctaaatcctgtgcaagat
ggcgaattacaatgtcaagaaaattccactaatgaagatattgatgatattgatgatggt
agagaaaaacctgttgaacacctcgatgcaagcttattatga
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