Gossypium arboreum (tree cotton): 108464002
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Entry
108464002 CDS
T05776
Name
(RefSeq) serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' kappa isoform-like
KO
K11584
serine/threonine-protein phosphatase 2A regulatory subunit B'
Organism
gab
Gossypium arboreum (tree cotton)
Pathway
gab03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
gab00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
108464002
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
gab01009
]
108464002
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gab03019
]
108464002
03036 Chromosome and associated proteins [BR:
gab03036
]
108464002
Protein phosphatases and associated proteins [BR:
gab01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
108464002
Messenger RNA biogenesis [BR:
gab03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
108464002
Chromosome and associated proteins [BR:
gab03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
108464002
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
B56
ARM_ARMC5
Sec7-like_HUS
DUF6985
Motif
Other DBs
NCBI-GeneID:
108464002
NCBI-ProteinID:
XP_017619537
LinkDB
All DBs
Position
13:124961040..124964484
Genome browser
AA seq
506 aa
AA seq
DB search
MIKQILRKLPRKSQKSDLLDSAGNDSDNHASNSDDGVQCTNFGNKISSRLRVVKRVSSAV
FPASIMAGVEAVEPNLSFNNVSNPQKPNLFISKLNLCCEACNSSDPDKGTAEQDLKRRTL
IELVDFVSSGSAKFNEAAIAAMCKMCAINLFRVFPPKYRSNTASGEADDEEPMFDPAWSN
LQLVYDLFLQFIGYSSLDAKVAKKYIDQPFILRLLDLFESEDPRERDCLKTILHRIYGKF
TVHRPFVRKAVSNIIYTYVFETERHNGIAELLEIFGSIISGFAVPLKEEHKMFLCRVLIP
LHKPKSVGVYHQQLTYCVVQFIDKDPKLANSVITGLLKYWPVTNSQKELMFISESEEILE
MISMTEFQKIMVPLFRRIACCLNSFHYQVAERAHMLWNNEHVLNLIKHNRQVIFPLIFPA
LERNSRNHWHQTVLNLTKNTRKMLSEIDDELTLACERKLEEENSQSNEASEKRKLTWERL
ELAAGFEPAAANLVPPLKPATCSVTC
NT seq
1521 nt
NT seq
+upstream
nt +downstream
nt
atgatcaaacaaattctaagaaaacttccacgcaagtcgcaaaaatctgacttgttagat
tcggctggaaatgattcagacaaccatgcttctaactcggatgatggagttcaatgtaca
aattttgggaataaaatatcaagtcgattacgtgtggttaaacgggtgtcctcagctgtt
tttcctgctagcattatggctggagtggaggcagttgagccaaatctgtctttcaataat
gtttcaaatccacagaaaccgaacctgtttatcagtaaattgaacctctgctgcgaggct
tgtaattctagtgatcctgataaaggtactgccgagcaagatcttaaacgtcgaacactg
atagagcttgttgattttgtttcttcagggtctgcaaagttcaatgaagcagcaattgct
gcaatgtgtaaaatgtgtgctattaacctgttccgagtttttccacctaaatatcggtcc
aataccgctagtggtgaagctgacgatgaagaaccaatgtttgatcctgcctggtccaat
ttacaactcgtgtatgatctatttcttcagtttatcggttacagttctcttgatgcaaag
gtcgcaaaaaagtacatagatcagccttttattttgagattacttgacctatttgagtcc
gaggatccccgagaaagagactgtttgaaaacaatcctgcataggatttatgggaaattc
acggtgcacaggccctttgtacgaaaagctgttagcaatatcatctatacttacgttttt
gaaaccgaaaggcataacggtattgctgagctcttggagatttttggaagtattattagc
ggatttgctgtaccattgaaggaggagcacaagatgtttctatgtcgagtccttattcct
ctacacaaaccgaaatcagtaggtgtttatcatcaacaacttacatactgtgttgtgcag
tttattgataaggacccgaagttagctaatagtgtgattacgggactgttaaagtactgg
ccggttacaaatagccaaaaggagttgatgtttataagcgagtcagaagagattttggag
atgattagcatgactgagttccaaaagatcatggttccactgttccggcgtattgcgtgc
tgcttaaacagcttccattaccaggtggctgaacgagcccacatgctatggaacaatgag
cacgtccttaatcttatcaagcataaccggcaggtaattttccctcttatctttccggcc
ctcgagcggaattcccggaatcattggcaccaaactgtgcttaatctgacaaaaaacacg
agaaaaatgttgtctgagattgacgatgagctcacacttgcctgtgagcgtaagttggag
gaagaaaactcccagtcaaatgaggcatccgagaagaggaaactaacatgggaacgcctg
gaactagctgctggtttcgaacctgcagctgctaatcttgttcctcctctaaaaccggct
acctgctctgttacctgttaa
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