Gossypium arboreum (tree cotton): 108464020
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Entry
108464020 CDS
T05776
Name
(RefSeq) coatomer subunit beta-1-like
KO
K17301
coatomer subunit beta
Organism
gab
Gossypium arboreum (tree cotton)
Brite
KEGG Orthology (KO) [BR:
gab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gab04131
]
108464020
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
gab04147
]
108464020
Membrane trafficking [BR:
gab04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Coat protein complex I (COP-I)
108464020
Exosome [BR:
gab04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
108464020
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Adaptin_N
Coatomer_b_Cpla
Coatamer_beta_C
HEAT_2
Cnd1
HEAT
Coatomer_g_Cpla
Alpha_adaptinC2
Arm
Motif
Other DBs
NCBI-GeneID:
108464020
NCBI-ProteinID:
XP_017619567
LinkDB
All DBs
Position
13:123169002..123174220
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AA seq
948 aa
AA seq
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MEKSCTLLIHFDKGTPAIANEIKEALEGNDVSAKVDAMKKAIMLLLNGETLPQLFITIVR
YVLPSEDHTVQKLLLLYLEIIEKTDAKGRVLPEMILICQNLRNNLQHPNEYIRGVTLRFL
CRLNETEIIEPLIPSVLQNLEHRHPFIRRNAILAVMSIYKLPQGDQLLVDAPDMIEKVLS
TEQDPSAKRNAFLMLFTCAQERATNYLLTHVDRVSEWGELLQMVVLELIRKVCRTNRGEK
AKYIKIIIALLNSPSTAVIYECAGTLVSLSSAPSAIKAAANTYCQLLLSQSDNNVKLIVL
DRLNELKSSHRDVTVDLIMDVLRALSSPNLDIQRKTLDIVLELITPRNINEVVLLLKKEV
VKTQTGELEKNGEYRQMLIQAIHSCAIKFPEVASTVVHLLMDFLGDSNVASAIDVVVFVR
EIIETNPKLRVSIITRLLDTFYQIRAARVCSCALWIIGEYCLSLSEVESAIATIKQCLGD
LPFYSASEEGEATDASKKTPQASSITISSRRPAVLADGTYATQSAASETAFSPPTIVQGS
LASGNLRSLLLTGDFFLGAVVACTLTKLVLRLEEVQPSKVEVNKATTQTLLILVSMLQLG
QSHVLPHPIDNDSYDRIVLCMRLLCNTGDEIRKIWLQSCRQSFVKMLSEKQLRETEELKA
KAQVSHAQPDDLIDFYHLKSRKGMSQLELEDEVQDDLKRATGEFVKDADDANKLNRILQL
TGFSDPVYAEAYVTVHHYDIVLDVTVINRTKETLQNLCLELATMGDLKLVERPQNYTLAP
ESSKQIKANIKVSSTETGVIFGNIVYETSNVLERTVVVLNDIHIDIMDYISPAVCSDTAF
RTMWAEFEWENKVAVNTVIKDEKEFLNHIIKSINMKCLTAPSALDGECGFLAANLYAKSV
FGEDALVNLSIEKQADGKLSGYIRIRSKTQGIALSLGDKITLKQKGGS
NT seq
2847 nt
NT seq
+upstream
nt +downstream
nt
atggagaagtcatgcactcttcttattcactttgacaaaggaacacctgcaattgctaat
gagattaaggaagcgcttgaaggaaatgatgtttctgcaaaggttgatgccatgaagaaa
gcaattatgcttttgttgaatggcgagaccctcccccagctttttatcaccattgtcaga
tatgttttgccttcagaggatcacactgtccaaaaacttttgcttctatacttggagata
attgagaaaactgatgcaaaggggagggtattacctgaaatgatattgatctgccaaaat
ttgaggaacaatcttcaacatccaaatgaatatattcgtggtgtgaccttgaggtttctc
tgccgcttgaatgagacagagattattgaaccactaatcccatcagttctacaaaatctt
gagcaccgacatccatttattcggaggaatgctatattagctgtcatgtccatatataag
ctcccacaaggtgatcagctcttggttgatgcacctgatatgattgagaaggtcctttcg
acggagcaggatccatctgccaagcgaaatgcatttcttatgctatttacttgtgcacag
gaaagagccactaattacctcttgacccatgttgatagggtttctgaatggggtgaattg
cttcagatggttgtactggagttgattcgtaaggtttgcagaacaaaccgtggggagaaa
gcaaaatatattaagattattatagctttattaaattccccatcaactgcagttatttat
gagtgtgctggcacccttgtttctctctcatctgctccctctgctattaaggctgctgcc
aacacttattgtcagcttcttctatctcaaagtgacaacaatgtcaagcttattgtgtta
gatcggctgaatgagctcaaatcttctcatagagatgttacggttgatttaatcatggat
gtgcttagggcactttcgagtccaaatcttgacatccagaggaagacgctcgatattgtt
cttgaattaataactccacgaaatatcaatgaggttgttcttttgttgaagaaggaagtt
gtgaagactcaaactggagaacttgagaagaatggagaatatagacaaatgctcattcaa
gctattcattcatgtgcaatcaagttcccagaagttgcaagcactgttgtgcatctgctg
atggatttcttgggagacagtaatgttgcttctgctattgatgttgtagtttttgttcga
gaaataattgaaaccaaccctaaacttagggtgtccattataactaggctgttggacaca
ttctatcagatccgagctgcacgtgtttgctcctgtgccctttggattattggagagtat
tgcctttcactgtctgaagttgagagtgccatagcaaccatcaagcagtgtcttggagac
ctacctttctactctgcttctgaggaaggagaagctactgatgcctcaaagaaaactcca
caagcaagctccattaccatctcctccaggagaccagctgttctggctgatggtacctat
gcaacccagagtgctgcctctgagacagctttctcccctcccactattgttcagggatca
ttggcttctgggaatctcaggtctcttctccttactggagattttttcctcggggcagtt
gttgcttgcacactgactaaacttgttttgagattagaagaggtgcagccgtccaaagtt
gaagttaataaagcaaccacacagacattactgatcttggtgtctatgctgcaattagga
cagtctcatgttcttccacacccaattgataatgattcgtatgataggattgttctctgc
atgagattattgtgcaataccggtgatgagatcaggaaaatatggttgcagtcttgccgt
cagagttttgttaaaatgctttcagagaaacagttgagagaaactgaggaattaaaggcg
aaggctcaggtttctcatgcacaaccagatgacctcattgacttctaccatttaaaaagt
cgcaagggaatgagtcagcttgaattggaggatgaggtccaagatgatttgaaacgtgca
actggagagtttgtcaaggatgcagatgatgcaaataagcttaatcgcattcttcaactg
actggatttagtgacccagtatatgctgaagcatatgtgactgtccatcactatgatatt
gttcttgatgtcactgttattaatcgaaccaaggaaactcttcagaatttgtgcttggag
ttggcaaccatgggtgatctgaaacttgttgagcgtccacaaaactataccctcgctcct
gaatctagcaagcaaataaaggctaacatcaaggtgtcttcaactgagactggtgtcata
tttggcaatatcgtttacgagacttcaaatgtgctcgaaagaactgttgttgttcttaat
gacattcatattgatatcatggactacatctctcctgccgtttgtagtgatactgcattc
agaactatgtgggcagaatttgagtgggaaaataaggttgctgttaacactgtaattaaa
gatgagaaggaattccttaaccatattatcaagtccatcaacatgaagtgtctcactgca
ccatctgcgctagatggtgagtgcggattcctggctgctaacctgtacgcaaaaagcgta
tttggggaggatgcattggtaaatttgagtatcgagaaacaagcagacgggaagcttagt
gggtatatcaggataaggagcaagacccaaggaattgctcttagtcttggggataaaatc
actttaaaacaaaagggaggcagttga
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