Gossypium arboreum (tree cotton): 108464048
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Entry
108464048 CDS
T05776
Name
(RefSeq) DNA topoisomerase 2 isoform X1
KO
K03164
DNA topoisomerase II [EC:
5.6.2.2
]
Organism
gab
Gossypium arboreum (tree cotton)
Brite
KEGG Orthology (KO) [BR:
gab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
gab03032
]
108464048
03036 Chromosome and associated proteins [BR:
gab03036
]
108464048
Enzymes [BR:
gab01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
108464048
DNA replication proteins [BR:
gab03032
]
Eukaryotic type
DNA Topoisomerases
108464048
Chromosome and associated proteins [BR:
gab03036
]
Eukaryotic type
Chromosome condensation proteins
Other regulators of chromosome condensation
108464048
Centrosome formation proteins
Centriole proteins
108464048
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
TOPRIM_C
DNA_gyraseB
Toprim
HATPase_c
Motif
Other DBs
NCBI-GeneID:
108464048
NCBI-ProteinID:
XP_017619616
LinkDB
All DBs
Position
10:complement(127761212..127767916)
Genome browser
AA seq
1460 aa
AA seq
DB search
MVADSKLPLQSSNNVNTKASKTIEETYQKKTQLEHILLRPDTYIGSIEQHTQRLWVYEND
EMVHRDIKYVPGLYKIFDEILVNAADNKQRDPSMDSIKVVIDAEQNLISVYNNGDGVPVE
IHQEEKVYVPELIFGHLLTSSNYDDNVKKTTGGRNGYGAKLTNIFSTEFVIETADGKRQK
KYKQVFKNNMGNKTEPVITKCKEGENWTRVTFKPDLAKFNMTHLEDDVVALMRKRVFDLA
GCLGKTVKVELNGKRIAVKSFLDYVNLYLSAASKNRSEPLPRISEKVNARWEVCVSLSEG
QFQQVSFVNSIATIKGGTHVDYVTNQISNYVMNAVNKKNKNANVKAHNVKNHLWVFVNAL
IDNPAFDSQTKETLTLRQSSFGSKCELPEDFLKKVAKSGVVDNLLQWAEFKHSKDLKKTD
GTKSGSIRGIPKLDDANEAGGRNSDKCTLILTEGDSAKSLAVAGLSVVGRNHYGVYPLRG
KLLNVREASHKQLMENAEIQNLKRILGLQQNKEYTDVKSLRYGHLMIMTDQDHDGSHIKG
LLINFIHSFWPSLLKVKSFMVEFITPIVKATRKVNKQEEELCFYTMPEYQAWKESLGNNA
KSWKIKYYKGLGTSTGPEGKKYFKDIDKHMKEFVWEGDRDGDAIELAFSKKKIEARKNWL
RQFEPGTHLDHNDKLINYSDFINKELILFSMADLQRSIPSMVDGLKPGQRKILFCAFKRN
FVHEAKVSQFSGYVSEHSAYHHGEQSLCSTIVGMAQDFVGSNNINLLRPGGQFGTRNQGG
KDAASARYIFTNLTTITRYLFRKDDDGLLDYLNEDGQSIEPSWYVPVIPMVLVNGSEGIG
TGWSSYIPNYNPRDIVANVRRLLNGEPMEPMHPWYRGFKGTIEKTASKESGVTYTISGIV
EEVDETTLKITELPIRRWTQDYKEFLESIITANDSFIKEFKQYSDDRTVHFEVFMTEENM
MLAKQEGLMKKFKLTTTVSTSNMHLFDSRGMIKKYDTPEEILDEFYHLRLEFYEKRRKHM
LDTLELELLKMDNKVRFILDVVKGNIIVNNRKRADLFLELQEKGFTPFPKKTKGVEVAVA
GDIDHEGEPELSPEATRASDYDYLLSMAIGTLTLEKVQELCSDRDKLEHEVEELRKHTPK
SLWLKDLEELEKQLDEQDQADLEAEEENSKNRAKGGVAGKKARRPVAPKNPKKVNKKDDP
QVPEASEISSTTAMEAENVPAVVKPKGRAGAKKKTKKQDDSDDDDDNDFDIPDLRERLAK
HNIDSSPDNSADMETELFQEPAGKKGPAKRAAATKKNPVISLSESIGEINISDGELEVVE
PAPAATKKGGRKPAAPKASKPPAAAKKRGPAAGKQQKLLTQMLKPAAEAEGSGISPEKKV
RKMRASPFNKKSGSVLGKTSSSSLSSMPEIDSDEDEEVAVVVEPRARPQRANRTKTTYVV
SDSETEEEVNDDSDFEEDED
NT seq
4383 nt
NT seq
+upstream
nt +downstream
nt
atggttgcagattcgaagctcccgctgcaaagcagcaacaatgtaaacactaaagcctcc
aaaactatagaggaaacctaccaaaagaagacccaattagaacacatccttctccgaccc
gatacctacatcggttccattgaacagcacactcagcgcctatgggtgtacgagaacgat
gagatggtccaccgagacataaagtacgtcccgggactttacaagatcttcgacgagatc
ttagtcaatgccgccgataataaacaacgggatccatccatggattccattaaagtggtg
attgatgcggagcagaacttgatttcggtttacaataacggggatggagttcccgttgag
attcatcaggaggagaaggtttatgtcccggagttgattttcggccatttgttgactagc
agtaactatgacgacaatgttaaaaagacgaccggtgggagaaatgggtacggagctaag
cttacgaatatattttcgactgagtttgttatcgaaaccgctgatggaaaacggcagaag
aagtataagcaggtatttaaaaacaatatgggaaacaaaactgagcctgttataacaaaa
tgtaaagagggcgagaattggacaagggttacatttaagccagacttggccaaatttaac
atgactcacctggaggatgatgtggttgcattgatgaggaagagggtgtttgatttagct
ggttgtcttggcaagaccgtgaaggttgagctgaatgggaaacgcattgccgtgaaatca
tttcttgattatgtcaacctttaccttagtgctgcctctaaaaataggagcgagcctctc
ccaaggatttctgagaaggttaatgcaagatgggaagtttgtgttagtctcagcgaaggg
cagtttcaacaggtcagctttgtcaatagtattgctacaatcaagggtggaacccatgtt
gactatgttaccaaccagatatctaattatgtgatgaatgctgtaaataagaagaacaag
aatgctaatgtcaaagcacataatgtgaagaatcatctgtgggtttttgtcaatgctctt
attgacaaccctgcttttgattcgcaaaccaaggaaactttgactcttcgtcagagcagt
ttcggctccaaatgtgaacttcctgaagattttttgaagaaagttgcgaagtctggagtt
gtggataatttgctccagtgggcagaattcaaacatagcaaagatcttaagaagactgat
ggaactaagtcaggtagtattcgaggaatccccaagctagatgatgctaatgaagctggc
ggacggaattcggacaaatgcacattgatattgacggaaggggattcagcaaaatctctt
gctgtggctggtctttctgttgtaggtcgaaaccactatggtgtttacccactgagaggt
aaactactgaatgtgagggaagccagccataagcagttaatggagaatgctgaaatacaa
aatcttaagcgaattcttggattgcagcagaacaaggagtatactgatgtcaaatctttg
agatatgggcatttgatgataatgactgatcaggatcatgatggttctcatatcaaaggg
ctgctgatcaattttattcattccttctggccttctttgctaaaagttaaatcattcatg
gttgagtttataactcctattgtgaaggctactcgcaaagtcaacaaacaggaggaggag
ttatgtttttatactatgcctgagtaccaagcttggaaggaaagtttggggaataatgca
aagagctggaaaataaagtactataaggggttgggaaccagcacgggacctgaagggaag
aaatacttcaaagatattgataagcacatgaaagagtttgtatgggaaggtgatagggat
ggtgatgcaatcgagcttgcttttagtaagaagaagatagaagcaaggaagaattggctg
cgacagtttgagccgggcacgcaccttgatcacaatgataaactcatcaattatagcgac
ttcattaataaggaacttattctgttttccatggctgatcttcaaagatcaattccttcc
atggttgatggcctgaagcctggtcaacggaagatccttttctgtgctttcaagaggaat
tttgtacatgaggcaaaggtttctcaattttcgggttatgtttcggagcattctgcttac
catcatggtgagcagagtctttgtagtaccattgttggaatggcccaggattttgtgggc
agtaacaacataaatcttcttcgtcctgggggtcaatttggtactcgtaaccagggtggc
aaagatgcagcaagtgcaaggtacatttttaccaatcttactaccattactcgatatctg
ttccgcaaggatgatgatggcctgctcgattacttgaatgaagatggccaatccattgag
ccttcctggtatgtacctgttataccaatggttctcgtgaacggaagtgaaggaattggg
acaggatggagctcttatatcccgaactataatccaagagatatagtggcaaatgtgagg
cgtttgctaaatggtgaaccaatggagcccatgcatccgtggtaccgaggtttcaaaggg
actattgagaaaaccgcatcaaaagaatctggtgttacctacaccataagtgggattgta
gaggaggttgatgagaccacactgaaaataactgaacttccaatccgtaggtggactcaa
gattataaggaatttttggaatccatcataacagcaaatgattcattcatcaaggaattt
aagcaatacagtgatgatagaactgtacattttgaggtcttcatgactgaagagaacatg
atgttggccaagcaagagggtttgatgaagaagtttaagctaacaacaactgttagcaca
agtaacatgcacttgtttgattcgagagggatgatcaagaaatatgacacccctgaggaa
atacttgacgaattttatcacttaaggctcgaattttacgagaaacgaaggaaacatatg
ttggacactcttgaactcgagttattgaaaatggataacaaagtcaggtttatccttgat
gttgttaaggggaacatcattgtgaacaataggaagagagctgacttgttccttgagcta
caagaaaaagggtttactccattcccgaagaaaacgaaaggtgttgaagtagcagtggcg
ggggatattgatcatgaaggggaacctgaacttagccctgaagcaacaagggcaagtgat
tatgactatctgttatccatggcaatcggtactctgacccttgagaaggtccaagagctt
tgttctgatagggataaacttgagcatgaggttgaagagttgaggaaacacactccaaag
tctttatggctgaaagatcttgaagaactcgagaagcaacttgacgagcaagatcaagca
gacctggaagcagaagaagagaacagcaaaaacagagcgaagggaggtgtagctggcaag
aaggctcgaagaccagtggcacctaaaaacccgaagaaggtaaacaagaaagatgaccca
caagttcccgaagcctcagaaatttcgtctacgacagcaatggaagcagaaaatgttcct
gctgttgttaaacccaaaggccgggccggtgcaaagaagaagacaaagaagcaggatgat
agtgatgatgatgatgacaacgactttgatattcctgatctaagggagcgacttgccaag
cataacatcgattcctctcctgataattccgctgatatggaaactgaattgtttcaagaa
cctgctggaaagaaagggcctgccaaaagggcagctgctactaagaagaatcctgtcatt
tctctatccgagagcataggcgaaatcaacatcagcgatggagaattggaggttgtcgag
ccagctccagcagcaacaaagaaaggaggacgaaaaccggctgctccaaaagccagtaag
ccacctgcagcagcaaagaaaagaggtccagcagcaggcaagcaacaaaagcttttgaca
caaatgctgaaacccgcagcagaagctgagggttcagggatatcgcctgaaaagaaagtg
aggaaaatgagggcgtcaccgttcaacaagaaaagcggttcggtcttggggaagacgagc
agttcttcactgtcttcaatgccggaaatcgatagcgatgaagatgaagaagtagctgtg
gttgtggaaccaagagctagaccacagagggcaaaccggaccaagacaacttatgttgtt
agtgattccgagactgaggaagaagttaatgatgactcagatttcgaggaagatgaggat
tga
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