Gossypium arboreum (tree cotton): 108464051
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Entry
108464051 CDS
T05776
Name
(RefSeq) EIN3-binding F-box protein 1-like
KO
K14515
EIN3-binding F-box protein
Organism
gab
Gossypium arboreum (tree cotton)
Pathway
gab04016
MAPK signaling pathway - plant
gab04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
gab00001
]
09130 Environmental Information Processing
09132 Signal transduction
04016 MAPK signaling pathway - plant
108464051
04075 Plant hormone signal transduction
108464051
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
gab04121
]
108464051
Ubiquitin system [BR:
gab04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
108464051
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_6
LRR_4
LRR_At5g56370
F-box-like
F-box
LRR_RPS2
LRR_At1g61320_AtMIF1
Motif
Other DBs
NCBI-GeneID:
108464051
NCBI-ProteinID:
XP_017619619
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Position
13:complement(123499847..123503838)
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AA seq
639 aa
AA seq
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MSKLFSFSGSDNFFPGGSIYPNPKESSLFFSLGHHVDVYFPHHKRSRFSPPIVFSGERVE
KKNPSIEILPDECLFEIFRRLPGGQERSSCACVSKRWLTLLSNIHRDEINDNNKSGVVSK
VEDQDVEGDGYLSRVLEGKKATNVRLAAIAVGTASRGGLGKLSIRGSNSTCGVTNVGLRA
ISRGCPSLRVLSLWDSSSVGDQGLCEIADGCHQLEKLDLCHCPAITDKSLLAVAKGCPNL
KDLTIEGCANIGNEGLQALARCCPNLKAISIKDCPLIRDQGIVSMLSSASFTLTKIKLQA
LNITDVSLAVIGHYGKAVTDLSLISLPNVSEKGFWVMGNGHGLQKLKSFAVTSCRGVTDL
GLEAVGKGCPNLKQLCLHKCAFLSDKGLVSFAKTASSLESLQLEECHRITQFGFFGFLLN
CGAKLKAFSLVNCYGIKDLNLGLPSVLPCKSLRSLSIRNCPGFGDASLAALGKLCPQLEH
VELSGLHGISDAGFLPLLETREADLVKVNLSGCVNLSDKAVCIMADLHGWTLEMLNLEGC
KISDVSLVAIAKNCQLLSDLDVSKCAITDSGIAALARSNQIKLQILSMSGCSKVSDKSMP
SLLKLGQTLLGLNLQQCKAISSSAVDLLVEQLWRCDILF
NT seq
1920 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaagctattttcttttagtggaagtgataattttttccccggggggtcaatttac
ccaaaccccaaggagtcaagtctctttttctcccttggacaccatgtggatgtatatttt
cctcatcacaagaggtcccgcttcagtccccccattgttttctctggagaaagggttgag
aagaagaatccatcaattgagattctccctgatgaatgcttatttgaaatcttcagacgg
ttacctggaggccaagagaggagttcctgtgcttgtgtttccaagcgctggcttacgctt
ctaagcaacatccacagagatgaaatcaatgataacaacaagagtggagttgtttctaag
gttgaagatcaagatgttgagggtgatggatacctctctagggttttggaagggaagaaa
gcaacaaatgttagacttgctgctattgctgtaggaactgcaagccgtggaggattgggt
aagctttctattagaggaagcaactcgacatgtggagtgactaacgttgggctcagggcc
atttcccgtggatgcccttctctaagggttctttcgttgtgggattcgtcttctgttgga
gatcaaggtctgtgtgagattgctgatgggtgtcaccagctagagaagcttgacctttgc
cactgccctgcaattactgataagtctttgcttgctgttgctaagggctgtcctaatttg
aaggatctgaccattgagggttgtgcaaacattggaaatgaaggcctccaagctcttgct
cgctgttgtccgaatctaaaggctatttcgatcaaagactgtccccttataagagatcaa
ggaattgtgagcatgttgtcttcagcttcatttaccctcacaaaaataaagctccaggcc
ttgaatatcaccgatgtctctcttgctgttataggtcactatggcaaggctgtgactgat
ctttctctcattagtcttccaaatgtgagtgagaagggcttctgggtaatgggtaatggt
catgggctacagaaattgaaatcttttgcagttacatcctgccgtggtgtaacggacttg
ggacttgaagctgtcggaaagggttgcccaaatttgaaacagttatgcctccataaatgt
gctttcttatctgataaagggttggtgtctttcgccaaaacagctagttcactagagagc
ttgcaacttgaggagtgccacaggatcacccaatttgggtttttcggtttccttcttaac
tgtggtgcaaagttgaaggctttttctctcgtgaactgctatggtataaaggacctaaac
ctgggattgccttctgtattgccttgcaaatcccttcgatcactatccatccgtaactgc
cctggttttggtgatgccagcttggctgcattagggaagttgtgccctcagttggagcat
gtagagttgagcgggcttcatgggatatcagacgctgggtttcttccattgcttgagact
cgtgaggcagatttggtgaaggttaatctcagcggttgtgttaatttaagtgacaaagct
gtctgtatcatggctgatttgcatgggtggactctagaaatgctgaatcttgaaggttgt
aagatcagcgatgttagtttggttgcaattgcaaagaactgtcagttactcagtgatctt
gatgtctccaaatgtgcaatcactgattctggaattgcagctctggctcgttctaatcag
atcaaactgcagatcctttctatgtctggttgctctaaggtctctgacaaaagcatgcct
tcacttctaaaactgggtcagaccctgttggggttaaacctacaacaatgcaaggcaatc
agcagcagcgcagttgacctactcgttgagcagctctggaggtgtgatatccttttctga
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