Gossypium arboreum (tree cotton): 108464102
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Entry
108464102 CDS
T05776
Name
(RefSeq) nuclear pore complex protein NUP98A-like
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
gab
Gossypium arboreum (tree cotton)
Pathway
gab03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
gab00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
108464102
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gab03019
]
108464102
03036 Chromosome and associated proteins [BR:
gab03036
]
108464102
Messenger RNA biogenesis [BR:
gab03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
108464102
Chromosome and associated proteins [BR:
gab03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
108464102
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nucleoporin2
Nup98_GLEBS
Motif
Other DBs
NCBI-GeneID:
108464102
NCBI-ProteinID:
XP_052883999
LinkDB
All DBs
Position
1:complement(27911802..27920773)
Genome browser
AA seq
1012 aa
AA seq
DB search
MFGTTNPFGQSSSSPFASQSVFGQTSASSNPFAPKPSFSSPNPFGSQTGGSVFGGTSTGV
FGAAQSSSPFSSTTAFGASSSPAFGSSTPTFGSSSSSFGGSSVFGQKPAFGFGSSPTQSN
PFGSTNQQSQPAFGSGIFGSSTPFGSTQSAFGSSPAFGSTSSPAFGATSTPAFGASSTPG
FGATSTPAFGASSTPAFGATSTPAFGSTGSPAFGSTGTAFGVSNAPVFGTGGTFGASSSP
AFGTSATPAFGASSSAFGGSSTPAFGASSTPSFSFGSSPAFGQSTPAFGSSPFGTTSFGA
QSSPFGSQSSAPAFGSTSLGQSPFGGQRGGSRVAPYTPTTDADSGSGQPGAKLESISAMP
VYKDKSHEELRWEDYQLGDKGGLQPAAQATGGIGFGASPVSTSPFGSSTFGQTSANPFSS
SSTNPFSLKPPSFNSTGFATSTTTSNPFQPTSSSLFGQASSTSLFSSSSTPTFGTGSSLF
GSSVTPSFSSSPSIFGTGAAPATTSAFATGINSGSSQTSPLFNSSPAIGQTGNAFGQMTS
TFGQNTSNFGQTSIFNTPSTGFSGNMFSSSLSLAPSSNPAAFGPTTPSFASPFQPAQTGG
AFSFSNFGQTQPGGGSGIFGQNNIGLSSATQTAAVVQPGTIINPYGTLPAMPQMSIGQAG
TAPSVQYGISSMPVVDKPAPARISPLLTSRYLSQRRIRWPARKYYPNNNGPKVPFFNDDE
ETPNTPKADAGFIPRENPRALIIRPTESWPSRASAEKASPLKVTSAAVHENGKISDDSSD
TGDKNENPAENGHVKERIHPVKGNQKANGVHDDHSAQKESYMTLNGHRAGEAAIVYEHGA
DIEALMPKLRRSDYYTEPRIQELAAKERAEPGYCRHVKDFVVGRHGYGSIKFLGETDVRR
LDLESLVQFNNREVIVYMDDSKKPPVGQGLNKPAEVTLLNIKCFDKKTGQQYTDGPKIEK
YKEMLKRKAKDQGAEFISYDPIKGEWKFRVNHFSRYKLEDEDGVKMWGVADS
NT seq
3039 nt
NT seq
+upstream
nt +downstream
nt
atgtttggtacaactaatccttttgggcaatcatcaagtagcccatttgcatcccaatct
gtttttgggcagaccagtgcaagtagcaatccatttgcacctaaaccttccttcagtagt
ccaaacccttttggttcccaaacagggggttcggtatttggaggtacttctactggagtg
tttggtgcggcccaatcttcttctcccttctcctcaacaactgcctttggtgcctcttca
tctccagcttttggttcatctactcccacttttggcagttcatcatcatcttttggtggg
tcttctgtttttggtcagaagcctgcatttggctttgggtcaagtcccacccaatcaaat
ccttttggaagcacaaatcagcaatcacaacctgcatttggtagtggtatatttggttcc
tccacaccgtttggttcaactcagtcagcgtttggttctagtcctgcctttggttccact
agtagcccggcttttggtgcgacaagcacccctgcgtttggcgcctcaagcactccaggt
ttcggtgccacaagcacccctgcgtttggtgcctcaagtacccccgcatttggtgccacg
agcacccctgcatttggttcaactggaagtccggcatttgggagcactggaactgcattt
ggtgtgtctaatgccccagtttttggaactggaggtacatttggggcatcaagctcacct
gcgtttggcacttccgcaactcctgcttttggagcttcaagttctgcttttgggggttca
agcactcctgcttttggagcatcttctactccatcgttcagctttgggtctagcccagct
tttggccaatcaacgccagcatttggtagtagtccatttggaacaacctcatttggagcc
cagagttctcctttcggaagtcaatcttctgccccagcatttggaagcactagtctcggc
cagtctccttttggaggtcaacgtgggggaagtagagtagctccttacacacctacaact
gatgcagatagtgggagtggacagccaggtgcaaagttggagtcaatttcagcaatgcct
gtttataaagataaaagtcacgaggagctgagatgggaggattatcaattaggagataaa
ggtggactgcagccagctgctcaggctactggagggattgggtttggtgcgtcacctgta
tctacaagtccttttggttcttcaacatttggccaaacatctgcaaatcctttttccagc
tcaagtaccaacccatttagtttaaaacctccatccttcaatagtacaggttttgcaacc
tcgactactacatcaaacccctttcaaccaacatcatcaagcctttttggtcaagcttct
tcaacttcattatttagttcatcatctactcctacatttggaaccggttcatctcttttt
ggctcatctgtcactccttcattttcatcttcaccgtccatttttggtactggtgcagct
ccagcaacaacttcagcatttgccacaggcataaattctggcagcagtcagacatcacct
ctgttcaattcttcccctgcaattggacagacaggcaatgcttttggccagatgacctct
acctttggacagaatactagtaacttcggtcaaacaagcattttcaacacaccttccact
ggatttagtgggaatatgttttcaagctcactatcattggctccttctagcaacccagcg
gccttcggcccaacaactccttcttttgcttcaccttttcaaccagctcagaccggtggt
gctttcagctttagcaattttggtcagacacaacctggtggtggatctggcatttttggt
cagaataatattggcctatcgtctgctacacagactgctgctgtagtacaaccagggact
attataaacccctacggtacactccctgcaatgcctcaaatgtcaattggtcaggctggg
actgcaccgtcagttcagtatggaatttccagcatgcctgtggtggacaaacctgctcct
gctagaatatcgcctttattgacttctcggtacctttcccaaaggcggattaggtggcct
gcaaggaaatattatcctaataataatggtccaaaggttccatttttcaatgatgatgaa
gagacacccaacacacctaaggctgatgccggttttatccctagggaaaatccaagggct
ttgatcattcgtcccacagaaagttggccttcaagagcttctgctgagaaggcatctcca
ttgaaggttacatccgctgctgtgcatgagaatggcaaaatttctgatgatagctccgac
actggggataaaaatgaaaatccagccgaaaatggccatgtgaaggagcgaattcaccca
gtcaaaggtaaccagaaagctaatggagtccatgacgatcattctgctcagaaagagtca
tacatgacactcaatggccacagagcaggtgaggctgctattgtctacgagcacggggca
gacattgaggctttaatgccaaagcttaggcggtctgattactatacagaacctcgaatc
caagaactggctgcaaaggaaagggctgaaccagggtactgtcggcatgtcaaggatttt
gtggttggacggcacggttacggaagcatcaagttcctgggtgagacagatgtgagacgt
cttgatttggagtcccttgtgcagttcaacaaccgcgaggtaatagtttacatggatgat
agcaagaaacctcctgttggacaaggtctcaataagcctgcagaggtaacacttcttaac
atcaagtgtttcgataaaaagacaggacagcagtatacagatggtccaaaaatcgagaaa
tataaggaaatgcttaaaaggaaagccaaggaccaaggagctgaatttatttcctacgat
cccatcaaaggagagtggaaattcagggttaatcacttcagcaggtataagttggaagat
gaagatggtgtcaaaatgtggggtgttgcagatagctga
DBGET
integrated database retrieval system
