Gossypium arboreum (tree cotton): 108464129
Help
Entry
108464129 CDS
T05776
Name
(RefSeq) 3-ketoacyl-CoA synthase 10
KO
K15397
3-ketoacyl-CoA synthase [EC:
2.3.1.199
]
Organism
gab
Gossypium arboreum (tree cotton)
Pathway
gab00062
Fatty acid elongation
gab01100
Metabolic pathways
gab01110
Biosynthesis of secondary metabolites
gab04626
Plant-pathogen interaction
Module
gab_M00415
Fatty acid elongation in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
gab00001
]
09100 Metabolism
09103 Lipid metabolism
00062 Fatty acid elongation
108464129
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
108464129
Enzymes [BR:
gab01000
]
2. Transferases
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.199 very-long-chain 3-oxoacyl-CoA synthase
108464129
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAE1_CUT1_RppA
ACP_syn_III_C
Chal_sti_synt_C
Chal_sti_synt_N
ACP_syn_III
Motif
Other DBs
NCBI-GeneID:
108464129
NCBI-ProteinID:
XP_017619729
LinkDB
All DBs
Position
13:124190829..124193426
Genome browser
AA seq
548 aa
AA seq
DB search
MVVVLHRYTRSFNMARNEQDLLSTEIVNRGIESSGPNAGSLTFSVRVRRRLPDFLQSVNL
KYVKLGYHYLINHGIYLATIPVLVLVFSAEVGSLSREELWKKLWEDARYDLATVLSFFAV
FVFTVSVYFMSRPRSIYLIDFACYRPHDDLKVTKDQFIELARASGKFDEASLEFQKKILK
SSGIGDETYVPKVIMSKENCATMKEGRLEASTVMFGALDELFEKTRIRPKDVGVLVVNCS
IFNPTPSLSAMIINHYKMRGNILSYNLGGMGCSAGIIAVDLARDMLQANPNNYAVVVSTE
MVGYNWYPGRDRSMLVPNCFFRMGCSAVLLSNRRRDYRRAKYRLEHLVRTHKGADDRSFR
SIYQEEDEQGFKGLKVSKDLMEIGGDALKTNITTLGPLVLPFSEQLFFFATLIWRHFFGG
DKSKTSLSPSSKPYIPDYKLAFEHFCVHAASKTVLDELQKNLELSENNMEASRMTLHRFG
NTSSSSIWYELAYLEAKERVKRGDRIWQIAFGSGFKCNSVVWRSMRRVRKPSRDNPWLDC
IDRYPVRA
NT seq
1647 nt
NT seq
+upstream
nt +downstream
nt
atggtggtggttcttcaccgttacaccaggtcttttaatatggctagaaatgagcaagat
ctgttgtcaactgagattgtcaaccgtgggatcgaatcatcgggaccgaacgccggttcg
ttaacgttctcggttcgggttcgaagacgactacctgattttcttcagtcagttaacttg
aagtatgtgaagttagggtaccattatttgatcaaccatggtatatatttggctaccata
cctgttttggtactcgtttttagtgccgaagtgggtagtcttagtagggaagagctttgg
aaaaagctttgggaagatgctcgttatgatctcgccaccgtgctgtcttttttcgctgtt
tttgtgttcaccgtttccgtttacttcatgtcacgccctcgttccatttatctaattgat
ttcgcttgttatcgtcctcacgatgacttaaaggtgacgaaagatcagttcattgagctt
gcaagagcatcaggcaagttcgatgaagcgagtcttgaattccagaaaaagatactgaaa
tcttcagggattggggacgaaacatatgttccgaaggtgattatgtctaaagaaaactgt
gccacaatgaaagaaggccgtctcgaggcgtcgactgtgatgtttggtgccttggatgag
ctctttgagaaaaccaggatccgacccaaggatgttggggtcctcgttgtgaactgtagc
atattcaacccgactccgtccctctcggcgatgatcatcaaccattataagatgagaggt
aatattttgagctacaacctcggcgggatggggtgcagtgcggggattattgcggtggat
ttggctcgagatatgttgcaagctaacccgaataactatgcggtggtggtgagcactgaa
atggtgggttataattggtaccctggacgggaccggtccatgcttgttccgaattgtttt
ttcaggatgggatgctccgctgtgcttttgtctaaccgccgtcgtgactaccgccgtgct
aagtatcgtcttgaacaccttgtacggacgcataaaggtgccgatgaccggagtttcagg
tcaatctaccaggaagaagatgaacaaggtttcaaaggtcttaaagtcagcaaagaccta
atggaaatcggcggcgacgccctcaaaaccaacatcacaacattgggtccactcgtcctc
cccttctccgaacaactcttcttcttcgccacccttatttggcgccatttcttcggcggc
gataaatccaaaacctccctatcaccgtcgtcgaagccatacatccccgactacaagctc
gccttcgaacacttctgcgtccacgccgcaagcaagacggtgctagacgagctgcaaaag
aacttggaactcagcgaaaacaacatggaagcatcgaggatgaccttacaccgattcggc
aacacatcgagcagcagcatatggtacgaattggcttatttggaagctaaagaaagggtt
aaaagaggggataggatctggcaaatagcattcggttctgggtttaaatgcaacagtgtg
gtttggcgatccatgcgtcgtgtgaggaagccttcaagggataacccatggcttgattgc
attgatagataccctgtgagagcttag
DBGET
integrated database retrieval system