Gossypium arboreum (tree cotton): 108464164
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Entry
108464164 CDS
T05776
Name
(RefSeq) LOW QUALITY PROTEIN: protein HASTY 1-like
KO
K14289
exportin-5
Organism
gab
Gossypium arboreum (tree cotton)
Pathway
gab03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
gab00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
108464164
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
gab03016
]
108464164
03036 Chromosome and associated proteins [BR:
gab03036
]
108464164
Transfer RNA biogenesis [BR:
gab03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
108464164
Chromosome and associated proteins [BR:
gab03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Other miRNA pathway proteins
108464164
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
108464164
NCBI-ProteinID:
XP_052880168
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Position
13:87311673..87320031
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AA seq
1197 aa
AA seq
DB search
MDEGNKNSIGNNVARAIVAALDWNSTPDARKAAVSYLESIKAGDIRVLANTSFRLVKKDW
SSEILLHAFKMLQHLVRFRWEEVGPLEHRNFANATFELMSEIADTCEEWALKSQTAALVA
EIVRREFLNLWQELLPSLVSLSSKGPVQAELVSMMMRWLPEDITVHNEDLEGDRRRLLFR
GLTQSLPEIFPLLYTLLERHFGAAMSEVGRQQLDIAKQHAAAVTTTLNAVNAYAEWAPLS
DLSKYGIIHGCGFLLSSPDFQLHACEFFKLVSPRKRPVYDSASDFDSAMSSIIQILMNVS
REFLVRSSPAGGAIDESDYEFVEYVCESMVSLGSSNLQCIVGDSTTFSLYLQQVLGFFQH
FKLALHYQSLQFWLVLLRDAMSKPKLSVHSSGDGLTATNVDSTLAQVDEEKRKILSFLND
DICSTILDISFQRMLKKEKLMTETALSPGILELWSDDFEGKGDFGQYRSRLFELIKFIAS
NKPLVAGAKVSERIIMIIKSLLNSPMPSQDLAVMESMQMALENVVISIFDGSNEFAGGSS
EVHLALCRIFEGLLRELLSLNWTEPALVEVLGHYLEAMGPFLKYFADAVASVINKLFELL
NSLPFIVKDPSTRGARHARHARLQICTSFIRIAKAADKSILPHMKGIADKMACLQREGRL
LRSEHNLLGEAFLVMASTAGIQQQQEVLAWLLEPLSQQWIQIEWQNXYLSEPLGLVGLCS
EKALKRSGTRKGNSNLQNSSTAISTPHPLASHLSWMLPPLLKLLRGIHSLWSPSVFQMLP
GEIKAAMSMSDVEQSSLLGGGNPKLSKGALTFVDGSQFDMNKEGYIKPNEADIQNWLKGI
RDSGYNVLGLSTTIGDPFFKCIDIDFVSLTLIENIQSMEFRHTRLLVHSILIPLIKSCPL
DMWEVWLERLLHPLFIHCQQALSCSWSSLLHEGRAKVPDNHGILTGSDLKVEVMEEKLLR
DLTREICSLLSTIASPGLNASLPSLEHAGHVGRVDTSSLKDLDAFASSSMVNFLLKHKSL
AIPVLQISLEAFSWTDSEAVTKVCAFSAAVVLLAIFTNNVDLREYVSRDLFSAVIQGLAL
ESNAVISADLVSLSRDIFIYLCNRDPGPRKILLSLPCISPNDLHAFEEALTKTASPKEQK
QLMKSFLLLATGNNLKALAAQKCVNIITNVTDKPRSSVNAPENRIDEGETVGLAAIL
NT seq
3594 nt
NT seq
+upstream
nt +downstream
nt
atggatgaaggcaacaaaaacagcataggaaacaatgtggccagagccattgttgctgct
cttgattggaactccactcccgatgctcgcaaagccgccgtttcttaccttgaatcgatt
aaagcaggagatatacgggttttggcaaacacatcattccgtttagtgaaaaaagattgg
tcttcagagattctcttacatgcatttaaaatgctacagcacttggttcggtttcggtgg
gaggaagttggtcctttagaacatagaaactttgcaaatgctactttcgagttaatgtct
gaaattgcagacacttgtgaggaatgggctttgaaaagtcaaactgctgcacttgttgct
gagattgttagaagagaatttctaaatctttggcaggagctgcttccctctcttgtttcc
ctatccagcaaaggccctgtacaagctgaattggtctccatgatgatgagatggttacct
gaagatattacagtccacaatgaagatttggaaggtgatcggcgtaggttactgttccgt
gggcttactcaatctttgccagaaatttttccactactgtatacgttactggaaaggcat
tttggagctgcaatgtctgaggtgggtagacaacaacttgatattgcaaaacagcatgca
gctgctgtaacaactactttaaatgctgttaatgcctatgctgaatgggctcctttgtcc
gatctttctaagtatggcatcattcacgggtgcggttttctactttcttctcccgatttt
cagcttcatgcttgtgagtttttcaaacttgtctctccaagaaagagacctgtgtatgac
tctgcttctgacttcgattccgcaatgagtagcatcattcaaatcttgatgaacgtatcc
cgagaatttttggtcagatctagcccagctggtggggctatagatgaaagtgactacgag
tttgtggaatatgtatgtgaaagtatggtgtctttgggttcctcaaatttgcaatgtatt
gttggagatagcactacattctcactctatttacagcaggtcttgggtttttttcaacat
tttaagctagctcttcattaccaatccctgcaattttggttggtgctgttgagggatgca
atgtcaaagccaaagctttcagtacattcatctggagatgggttgactgctaccaatgtg
gactctactttggctcaggttgatgaagaaaagagaaagattttaagttttctgaatgac
gatatttgtagtacaattctcgatatatctttccaacgcatgcttaagaaagaaaagctc
atgactgaaacagccctttctccggggattttggaattgtggagtgatgattttgaaggc
aagggtgattttggccagtaccgttctaggctgtttgagttaatcaagtttattgcttca
aacaagcctcttgtggctggtgctaaagtttctgagagaattattatgatcattaagagc
ctcttgaattctccgatgccatctcaggacttggctgtgatggaaagcatgcaaatggct
cttgaaaatgttgtcatctctatttttgatggatcaaatgagtttgccgggggtagttca
gaagttcacctggctttatgtagaatatttgaaggtttacttcgggaacttctttctttg
aattggactgagccagccctcgtggaagtacttggccactatctagaagcaatgggtccc
ttcctcaagtattttgccgatgcagttgccagtgtcatcaataagctttttgagctccta
aattcacttccttttattgttaaggatccttcaacgagaggtgcacgacatgcacgacat
gcaaggttgcagatttgtacgtcatttattcgaatagcaaaagctgctgataaaagtatt
ctgcctcatatgaagggtattgctgataagatggcatgtttgcaaagagaaggtcgtttg
cttcgtagtgaacataatcttctaggtgaagcatttcttgtcatggcttctactgcaggg
attcaacagcagcaagaagttttggcgtggttacttgaacctttgagccaacagtggata
cagatagagtggcaaaattagtacttgtctgaacctcttggtctagttggtttatgctct
gagaaagcacttaagaggagcggaacaaggaaaggcaattctaacttacagaacagctca
acagcaatttctactccacatccattagcttctcatctgtcgtggatgcttcctcctctc
ttaaaactgcttcgtggtatacattccctttggtcaccatctgtattccaaatgttaccc
ggagaaatcaaagcggcaatgagcatgagtgatgtggagcaatccagtcttcttggtggt
gggaacccaaaattgtcaaagggtgcattaacttttgtagatggatctcagtttgatatg
aataaggaaggatatatcaaaccaaacgaggctgacatacaaaattggctaaagggtatt
cgagacagtgggtacaatgtattgggcctatctacaaccatcggggatccgtttttcaag
tgcattgacattgattttgtttctttaactctaatcgaaaatatacagtcaatggagttc
agacatacgcggctgcttgttcattctattttgattccgctaattaagtcctgtcctctg
gacatgtgggaggtgtggcttgaaaggctattgcacccattatttattcattgtcagcaa
gctctaagctgttcatggtccagtcttttgcacgaaggccgagcaaaggtccccgataat
catgggattctcaccgggtctgacttgaaggtggaagtaatggaggagaaactgcttcga
gatttaactcgtgagatatgttcactcctctctactatagcatcacctggattaaatgcc
agccttccttcgttagaacatgctggccatgttggccgtgtcgacacatcttctctgaaa
gatttggatgcatttgcttcgagctctatggtcaatttccttttaaagcacaagagcctg
gcaattccagtgttacagatttctttagaagcattttcttggaccgacagtgaagcagtg
accaaagtttgtgctttctctgctgctgtagttcttctagctatatttacgaataatgtg
gatctcagggaatatgtttcaagggatctattttctgctgtcattcaaggtctggccctt
gagtcaaatgctgttatcagtgccgatcttgttagtctttctcgtgacatattcatatat
ctatgtaacagagatccaggccccaggaagattttactctccctcccatgtattagcccc
aatgacttacatgcctttgaagaagccttgacaaagacggctagtccgaaagaacaaaag
cagcttatgaagagcttccttttattagctacagggaacaacttaaaggctcttgctgct
cagaaatgtgtaaacattataacaaatgtcacagataagccacgtagttcagtcaatgct
ccagaaaatagaatcgatgagggggaaactgtaggattggcagctattttgtga
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integrated database retrieval system
