KEGG   Gossypium arboreum (tree cotton): 108464181
Entry
108464181         CDS       T05776                                 
Name
(RefSeq) protein NEDD1-like
  KO
K16547  protein NEDD1
Organism
gab  Gossypium arboreum (tree cotton)
Brite
KEGG Orthology (KO) [BR:gab00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:gab03036]
    108464181
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:gab04812]
    108464181
Chromosome and associated proteins [BR:gab03036]
 Eukaryotic type
  Centrosome formation proteins
   Pericentriolar materials (PCM)
    Other PCM proteins
     108464181
   Microtubules and associated factors
    gamma-tubulin ring complex
     108464181
Cytoskeleton proteins [BR:gab04812]
 Eukaryotic cytoskeleton proteins
  Microtubules
   Tubulin-binding proteins
    Gamma-tubulin complex components
     108464181
SSDB
Motif
Pfam: WD40_Prp19 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_EML_2 Beta-prop_RIG_2nd WDR55 WD40 Beta-prop_TEP1_2nd Beta-prop_EIPR1 Beta-prop_CAF1B_HIR1 WD40_MABP1-WDR62_2nd ANAPC4_WD40 WD40_MABP1-WDR62_1st Beta-prop_WDR75_1st WD40_RFWD3 EIF3I Beta-prop_EML Beta-prop_WDR90_POC16_2nd Beta-prop_WDR19_1st Beta-prop_IFT140_1st Beta-prop_IFT122_1st NBCH_WD40 Beta-prop_DCAF12 Beta-prop_WDR35_TULP_N NYD-SP28_assoc bZIP_2 PsbK
Other DBs
NCBI-GeneID: 108464181
NCBI-ProteinID: XP_017619815
LinkDB
Position
10:complement(128517404..128523008)
AA seq 791 aa
MNLPDPSSELLAASGGDTVKIFDIKLEPNDPCVLSYSPSPSCIVNSVKWNHTNLVVASAG
EDKKISLWRKNGQRIGTIPVDGTDSGDNIEESILAISFSNKGSRYICSGGSGQVVRIWDL
QRKRCIKWLRGHTSSITGVMYNCKDEHLASISLSGDLILHNLASGAKAAELKDPDAQELK
VLDYSRISRHILVTAGDDGSVHLWDTTGRSPKVSWLKQHSAPTAGISFSPSNDKIIASVG
LDKKLYTYDSGSRRPSAFISYEAPFSSLAFKDDGWTLAAGTGNGRVVFYDIRGKLQPFTV
LRAYSSSEALSSLCWQRSKPAIVNESTCTAETALLGGAMEDSVLMPDPLPSVTSTSLSSS
TAVSGSRITGRSGPAEVSSLTSSSGSTSSTLNLSSSLETPIRSHLWPGGTLTRLHAPRST
FNFKDDMEVFSPLVDVHPITPSLDKLWDGHDGAKKEHLPNDKKPSSLLFPSSRRFAFADD
GASDHPILDWKSSSMSQQDVTKSFTALESTPTPSSKSEETSITPPEAWGGEKISDKFAHL
RQLPSRFGMPASGGLTTSSIYAGQDQSSMLSQTSSNLSYENLHTKDVSSNQETSSLGFPE
HFSSSSMSALSFGSKGITRAGSLDSPKLASLAPPRRFSTYAERISTTSAFSDGTSHLVAS
PKTKKTGAETREELFNSLLSRSDSLTAAASGVLPAMNGGTLQPPRASQQDPQQGSNFTLQ
LFQRTLEETLDSFQKSIHGDMRNLHIEILRQFHMQEMEMSRVMSSILQNQAELMEEVKSL
RKENQQLRQLL
NT seq 2376 nt   +upstreamnt  +downstreamnt
atgaatctaccggatccgtcgtcggagttactagcagcgagtggcggcgacaccgtgaag
atattcgacatcaagcttgaaccgaacgatccttgcgttttaagttactcgccttctccg
agttgcattgtcaactcagttaaatggaaccacactaatttagtggtggcgagtgccgga
gaggataagaagatatccttgtggcggaaaaatgggcagaggattgggacaattccggtt
gatgggactgatagtggagataacattgaggagtccattttagctattagctttagcaac
aagggatccagatacatatgttcaggaggaagtggtcaagttgtgagaatatgggatttg
cagcggaagcgttgcatcaaatggttaaggggtcataccagctcaataacaggtgttatg
tataactgcaaagatgaacacttggcctccatcagcctaagtggggatctgatacttcac
aaccttgcttctggggcaaaggctgctgaattaaaagatcctgatgcacaggaactaaag
gtacttgattattcgcggattagtcgacacattttggtgactgcaggtgatgatggatct
gtccatttatgggataccactggtcgtagcccaaaggtctcttggttgaaacagcactct
gctccgacagctggcatcagtttctcaccctccaatgataagattattgctagtgttggg
ttggataagaagctatacacttatgactcagggtctagaagaccctcagctttcatttca
tatgaggcacctttttcttcattggcatttaaagatgatggttggacactggcagctggt
actggtaatggtagagtggtgttctatgatattcggggaaaactacagccttttactgtt
cttcgtgcttatagtagttcggaggctctttcaagtttatgttggcaaagatcaaaacca
gccattgttaatgagagtacttgcactgctgagactgctcttttgggaggtgcaatggag
gattctgttcttatgccagacccacttccatctgtgacatcaacaagcctttcatcatcc
acagcagtttctggttctcgtatcactggccgttcaggtcctgcagaagtatcttctctt
actagtagtagtggatcaacatcaagcacactcaatctctcttcttctctcgaaacacca
attagaagccatctatggccaggtggaacactaacgagattacatgctcctcgttctaca
ttcaatttcaaggatgatatggaggtattttcccctcttgtggatgttcatcctattaca
ccctcgctggataagctgtgggatggtcatgatggtgcaaagaaagagcacctacccaat
gataagaagccatcctccctgctgtttccttctagcaggaggtttgcttttgctgatgat
ggagctagtgatcacccaatacttgattggaagtccagttcaatgtctcaacaggatgtg
acgaagtcttttacagcattggaatctacccctacaccgtcttccaagagtgaagagact
tccatcactcctccagaagcttggggtggtgagaaaatatctgacaaatttgctcacctt
cgccagctgccatctcgttttgggatgccagcttctggtggtctgacaacgagctctatt
tatgctggacaagatcagtcttcaatgctcagtcagaccagttctaacctgagctatgaa
aatttgcacacgaaagatgtctcttcaaatcaggagacttcttcattgggatttcctgaa
catttctcctcgagctccatgtctgctttatcttttggttcaaaaggcattactagagct
ggcagccttgactcaccaaaactagcatctttagcaccgcctcgaaggttttcaacatat
gctgagagaattagtactacatctgcttttagtgatggaacatcccatttggtggcttct
ccaaaaacaaagaaaacgggagctgaaaccagagaagagctgtttaatagcctgttatcg
aggtctgattcattgactgcagcggcatcaggagttcttccagcaatgaatggaggaaca
ttacaaccccccagggcatctcaacaagatccccaacaaggaagcaactttactcttcag
ctatttcaacgaactctagaagaaaccctcgattcatttcagaaatccattcatggagat
atgaggaacttgcatattgaaattttaagacaattccacatgcaggagatggagatgtct
cgtgtgatgagctccatattacagaaccaagctgaactgatggaagaggttaagtctctc
aggaaagaaaatcagcagcttcgtcaattgctttga

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