Gossypium arboreum (tree cotton): 108464193
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Entry
108464193 CDS
T05776
Name
(RefSeq) elongator complex protein 1 isoform X1
KO
K11373
elongator complex protein 1
Organism
gab
Gossypium arboreum (tree cotton)
Brite
KEGG Orthology (KO) [BR:
gab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
gab03016
]
108464193
Transfer RNA biogenesis [BR:
gab03016
]
Eukaryotic type
tRNA modification factors
Elongator complex
108464193
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_ELP1_1st
Beta-prop_ELP1_2nd
A-sol_ELP1
TPR_ELP1
HB_ELP1
Beta-prop_WDR19_1st
TPR_GEMI5
Beta-prop_RIG_2nd
Motif
Other DBs
NCBI-GeneID:
108464193
NCBI-ProteinID:
XP_017619837
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All DBs
Position
10:126351840..126357618
Genome browser
AA seq
1325 aa
AA seq
DB search
MKNLKLYSEITSNLQLQSEGEVLLFSAYDIERNRFFFASSYNLIYTLHLSSLQNERAWTK
GPLQAEIDPLDLEPEDVITSFDYLMEKEALIVGTSNGLLLLHNVDGKETEVVGRVEGGVK
CISPSPDGDLLGVTTGLGQLLVMTHDWDLLYETALEDQPDGVDVSEPKFPSGEMFGSPIT
WRGDGKYFATLSEVLNSSSKRLKVWERDGGAVHASSEPKELMGSILDWMPSGAKIAAVCD
RKAQNEGPSIVFFERNGLERSSFLIGEPIDATVELLKWNCSSDLLAAVVRCGNYDSVKIW
FFSNNHWYLKHEIKYSRKDGVRFMWDPTKSQQLICWSLDGQVTVYKFFWVTAVTDESNAL
VIDGSKILVTPLPLFLMPPPMYLFSLNFPSAVREVAFYSMNGKNCLAALLSNGCLCVAEL
PTPDTWESLEGKEISVEPCASATPLGSFVHLIWLDPHVLLAVSHHGFNHSNCYFQPSSNE
DRLLGFYLQEIELSCSEDNVPGLLTCSGWHAKVSYRNLLEGLVVGVAPNPAKRSSAFVQF
DGGEVFEYTSKLGINKLDFKHDELRFSSSCPWMNVVLVGVTEPSKLLLFGLDDMGRLHVG
RKILCSNCSSFSFYSNLSDNVITHLILATKQDLLFIVDIGDILHGELELTCENFIHVGNK
RREEENINFINIWERGAKIVGVLHGDEAAVILQTNRGNLECIYPRKLVLASIVNALNQRR
FRDALLMVRRHRIDFNVIVDYCGLQVFIQLASEFVKQVKNLSYITDFVCAIKHENVTEKL
YKMFLSPPSCKEQKDLLTNDFKGSDASLDANNKVSLVLLAIRRALDEQVPESPARELCIL
TTLARSDPPALEEALERVKVIREMELSGSDDPRQVNCPSAEEALKHLLWLSDPEAVFEAA
LGLYDLNLAAIVALNSQRDPKEFLPFLQELERMPDLLMRYNIDLRLHRFEKALKHIVSAG
DSHFFDCMNLMKKNPQLFPLGLQLITDNTKRGQVLEAWGDHLSDEKCFEDAAATYLCCTN
LQKALKAYRECGNWSGMLTVAGLMKLEKNEVLQLAHELSEELQALGKPGEAAKIALEYCG
AINGGINLLISARDWEEALRVAFLHSREDLVSVVKSAALECASSLIDEYKEGLEKVGKYL
ARYLAVRQRRLLLAAKLQSEERSINDLDDDTASEASSTFSGMSVYTKGTRKSFAASTAST
TASGARDTRRQRSRGKIRPGSPGEEMALVEHLKGMSLTAGAKQELKSLLVSLVMLGEEET
ARKVQHVGENFQLSHLAAVRLAEDTLSDDTINEHGHTLERYLQKVKTELKDSDAFSWRCR
VFFSP
NT seq
3978 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaatctgaagctttattccgagattacatcgaatcttcagttacaatcagaaggc
gaagtattactgttctctgcttatgacattgaaagaaatcgcttcttctttgcttcttcg
tataatcttatttacacactccatctttcttctctccaaaatgagcgagcatggacgaaa
ggtcctttacaagcagaaattgatccattggatttggagcctgaggatgtcattacctcc
tttgattatcttatggagaaagaagcattgatagtgggcacttctaatgggctgttactg
ctgcataacgtggatggaaaggaaacggaagttgttggtcgagttgaaggtggagtcaag
tgcatttcgcctagtcctgatggagacttgctaggtgtaactactggcttagggcaacta
ctggtgatgactcatgattgggatttgttgtacgagactgctttggaggaccaacccgat
ggagttgacgtaagtgaaccaaaatttccatctggagaaatgtttggcagccccatcaca
tggagaggtgatgggaagtactttgccactctaagtgaggtgttgaattcttcgagtaag
aggctaaaagtctgggaacgggatggtggagctgtacatgcttcctctgaaccaaaggaa
ttaatggggtctattctggactggatgcctagtggagcaaagattgctgccgtttgtgac
aggaaggcacagaacgaaggtccatcaatagttttctttgaaagaaatgggttagaaaga
agctcgtttctcattggtgaaccaattgacgcaactgtagaacttctgaagtggaattgc
agttctgatcttcttgcagctgttgttagatgtggaaattatgattctgtgaagatctgg
tttttcagcaacaatcattggtatctaaagcatgaaatcaaatactcgaggaaagatggt
gttagattcatgtgggatccaacaaagtcacagcaattaatttgttggtctcttgatgga
caagtcacagtttacaagttcttttgggttacagctgtcacggatgaatcaaacgcttta
gttattgatggctctaagatacttgtgacccctcttcctttgttcttaatgccacctcct
atgtatttattcagccttaattttccaagtgccgttcgggaagtggctttttattccatg
aatggtaagaattgcttggctgcattgttatcaaatggttgtctgtgtgttgcagagctt
ccaacacctgacacttgggaatctctagaaggtaaagaaattagtgtggaaccatgtgca
tctgcaaccccattgggatcctttgtacatcttatatggctggatccacacgtgcttctt
gctgtttctcatcatggattcaatcacagcaattgttatttccaaccctcttcaaatgag
gataggcttcttggtttctatttgcaggagatcgagctctcttgttctgaagataatgtc
ccaggtctactgacatgctctggttggcatgcaaaagtttcatatcgaaatttgttggaa
ggacttgtagtcggtgttgctcccaatcctgctaaaagaagctcagcttttgttcagttt
gatggtggagaagtttttgagtatacatctaagttgggaattaacaaactcgattttaaa
catgatgagttaaggttttcttcatcttgcccctggatgaatgtggttctagttggtgtt
actgaaccatcaaagcttttgctttttggtcttgatgatatgggtaggctgcacgtcggt
aggaaaatattatgcagcaattgcagcagtttctcattttactctaatttatctgacaat
gtaatcacacatttgatccttgcaacaaaacaagatttgctctttattgttgacattggt
gatatattgcatggagaacttgaattaacatgtgaaaactttatccatgttggtaacaaa
cgaagggaagaggagaatattaacttcataaatatttgggaaagaggggccaaaattgtt
ggtgttttgcatggagatgaagctgctgttatattgcaaacaaatcgtggaaatctggag
tgcatctatccaagaaaattggtgctagcctcaattgtcaatgctttgaaccaaagacgc
tttagggatgcacttcttatggttaggcggcacaggattgattttaatgtgattgttgat
tattgtgggttgcaagtgtttattcaattagcttccgagtttgtcaagcaggtaaaaaat
ttgagttacataactgactttgtttgtgctattaaacatgaaaatgtgacggagaaactt
tacaaaatgtttctctctccacctagctgcaaggagcaaaaggatctgttaactaatgat
ttcaagggttctgatgctagtttagatgcaaataacaaggtctcattggtgcttctggcc
ataagaagggcacttgatgaacaagtacctgaaagtcctgcaagggagctctgtattttg
accactctggctcgtagtgatccccctgctcttgaagaggctttggagagggtaaaagta
atccgggagatggagttatcaggttctgacgacccaagacaagtaaattgcccttctgct
gaagaagctctaaaacatctactgtggttatcagatccagaggctgtctttgaagctgct
ttaggtctttatgatttgaaccttgcagctattgtggctctgaactctcagcgggaccct
aaggaatttcttccctttctccaggaattggaacgtatgcctgatctcttgatgcgctat
aatattgaccttaggctgcacaggtttgagaaggctctcaaacacattgtatccgcaggt
gacagccatttctttgattgcatgaaccttatgaagaaaaaccctcaactttttcctcta
ggacttcagctgataactgataatacaaaaagagggcaagtacttgaggcttggggagat
catcttagtgatgaaaaatgctttgaagatgctgctgccacttacttgtgttgcaccaat
ttgcaaaaggctttgaaggcatatcgtgaatgtggtaattggagtggcatgctgacagta
gccgggcttatgaagctagaaaagaatgaggttttgcaactggctcatgagctttctgaa
gaactccaagcccttggtaaacctggagaagctgccaagattgctttggagtactgtggg
gctattaatggtgggattaatttgctcatcagtgcaagggattgggaagaggctttgagg
gttgcttttttgcatagtagagaggatttagtctcagtagtgaaaagcgcagcacttgaa
tgtgcgagcagcctaatagatgaatataaagaagggcttgaaaaagtggggaaatatttg
gctcgctatttagctgttcgacagagaaggttgctgcttgcagcaaagctgcaatcggag
gaaaggtcgataaatgatcttgatgatgatactgcttcagaagctagtagtacattcagt
ggaatgagtgtctacacaaaaggcacaagaaaaagctttgctgcttcaactgcctcaacc
acagctagcggggcaagagataccagacgtcagcgaagtagaggaaaaattcgtcctgga
agcccgggcgaggagatggctcttgtggaacatttgaaaggcatgtccctaacagctgga
gcaaagcaggaactgaagtccttgctggtttctcttgtaatgcttggcgaggaagaaact
gcacggaaagtgcaacatgtgggagagaactttcaactttctcacctggctgcagtcaga
ctagctgaagatacattgtctgatgataccataaatgagcatggacatactttggagcgt
tatctccagaaagtaaagacggaacttaaggattcagatgctttttcatggcgctgtcga
gtattcttttctccttga
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