Gossypium arboreum (tree cotton): 108464274
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Entry
108464274 CDS
T05776
Name
(RefSeq) DNA mismatch repair protein MLH1 isoform X1
KO
K08734
DNA mismatch repair protein MLH1
Organism
gab
Gossypium arboreum (tree cotton)
Pathway
gab03430
Mismatch repair
gab03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
gab00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
108464274
03460 Fanconi anemia pathway
108464274
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gab03400
]
108464274
DNA repair and recombination proteins [BR:
gab03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
108464274
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Mlh1_C
DNA_mis_repair
HATPase_c_3
HATPase_c
Motif
Other DBs
NCBI-GeneID:
108464274
NCBI-ProteinID:
XP_017619959
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All DBs
Position
13:complement(100203606..100218322)
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AA seq
728 aa
AA seq
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MEIEPAEEVKEPPRIHRLDESVVNRIAAGEVIQRPVSAVKELVENSLDASSTSISVLVKD
GGLKLIQVSDDGHGIRYEDLPILCERHTTSKLSKYEDLQSIKSMGFRGEALASMTYVGHV
TVTTITRGQLHGYRVSYRDGVMENEPKACAAVKGTQIVIENLFYNMVARRKTLQNSADDY
TKIVDLLSRFAIHHIDVSFSCRKHGAARADVHSVATPSRLNAIRSVYGLSVAQNLIKIEA
SDNDPSSSVFEMDGFISNSNYVAKKTTMVLFINDRLVECTALKRALEIVYVATLPKASKP
FIYMSITLPPEHVDVNVHPTKREVSLLNQEVIVEKIQSVVESVLRNSNESRTFQEQTVEA
TPSVPSVTNNDLHLSPSPSGSKSQRVPVNKIVRTDSSDPAGRMHAYLYKNPQKYLGRDSS
LTTVRSSVRQRRNLKETADLTSIQELINDIDRKCHSGLLDIVRQSTYIGMADDVFALLQH
NTHLYLANVVNLSKELMYQQVLRRFAHFNAIQLSEPAPLQELIMLALKEEDSDLESNEND
DLKKKIAEMNTQLLNQKSEMLEEYFCIFIDSNGNLSRLPILLDQYTPDMDRVPEFVLCLG
NDVEWEEEKNCFQSLAAALGNFYAMHPPMLPNPSGKGLEFYRKRKHGKHTQDGGNSCHVA
DGTAEEDEFEHELLSEAETAWAQREWSIQHVLFPSMRLFLKPPNSMASNGTFVRVASLEK
LYKIFERC
NT seq
2187 nt
NT seq
+upstream
nt +downstream
nt
atggaaatagaacccgccgaagaagttaaagagccacccaggatccaccgcctggacgag
tctgtggtcaaccgaatcgctgccggagaggtaatccaacgccctgtctccgccgtcaaa
gagctagtcgagaatagtttagacgcttcctccacttccataagcgtccttgtcaaggac
ggtggtcttaaactcattcaagtctccgacgacggccatggcattcgatatgaggacttg
cctatattgtgcgagaggcatacgacgtcgaagttgtcgaaatacgaggatttgcagtca
ataaagtcgatgggttttagaggagaggcgttggctagcatgacatatgtgggtcacgtt
accgtcactaccattacccggggccaattgcatggatacagggtgtcttatagagatggt
gtgatggagaatgaacctaaggcatgtgctgctgtgaaaggaacccaaatagtgattgag
aatttgttctataacatggttgctaggaggaagacactgcaaaattctgctgatgattat
actaaaattgtagacttgctaagccgctttgccattcatcatatagatgtgagcttttct
tgtagaaagcatggagctgctagagcagatgttcactcggttgcaacaccatcaaggctt
aatgctatcagatctgtttatgggctttcggttgctcagaatctgataaaaattgaagct
tcagataatgatccttctagctcggtctttgagatggatggctttatctccaactcaaac
tatgttgcaaagaaaaccacaatggtgctatttattaatgatagattggttgaatgcact
gctttaaagagagctcttgaaattgtttatgttgcaaccttaccaaaagcttcaaaacct
ttcatttatatgtcaattacattgccacctgagcatgttgatgtgaacgtgcaccctaca
aagagagaggtaagccttttaaatcaggaagttattgttgagaagatacagtctgtggtt
gaatcggtgttgagaaactcgaatgagtcaaggacatttcaagaacagacggttgaagcc
actccatctgttccctcagttacaaacaatgatttacaccttagtccctcaccatctgga
tcaaaatcacagagagttccagtcaacaaaatagtgagaacagattcatcagatccagct
ggacggatgcatgcctacttatataagaatccccagaaataccttggaagagattctagc
ttgacaactgtgaggtcatctgttagacaaagaagaaacctgaaggaaacagcagatctt
actagcattcaggagcttattaatgatattgatagaaaatgtcactctggtctgctggac
attgtgagacaaagcacttatattggaatggctgatgatgtttttgcattgcttcagcat
aatactcatctctatcttgctaatgtggtgaacttaagcaaagaacttatgtatcagcaa
gttcttcgtcggtttgctcattttaatgctatacaactaagtgaaccagctcctttgcaa
gagttaatcatgttggccctgaaggaggaggactcggacctagaaagcaatgaaaatgat
gacctcaaaaagaagattgcagaaatgaatacacagctgcttaatcaaaagtctgaaatg
ttggaggagtatttctgcatttttattgattcaaatgggaatttatctagactgccaatt
ctacttgaccagtacactccagacatggatcgtgttcctgaatttgtgctatgtttgggc
aatgatgttgagtgggaagaagaaaaaaattgcttccaatcacttgcagctgctcttggg
aatttttatgctatgcatccgcctatgttgccaaatccatcaggcaaaggattggaattt
tacagaaaaaggaaacatgggaagcatactcaagatggaggaaattcttgtcatgtggca
gatggtacagcagaagaggatgaattcgaacatgaactactgtcagaggctgagactgca
tgggcccagcgtgaatggtcaatccaacatgtcttgtttccatccatgagactatttcta
aaacctccaaattcaatggcctctaatggaacatttgtcagggtggcttcactggagaag
ctctacaagattttcgagcgatgctag
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