Gossypium arboreum (tree cotton): 108464487
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Entry
108464487 CDS
T05776
Name
(RefSeq) cell division control protein 48 homolog C
KO
K14571
ribosome biogenesis ATPase
Organism
gab
Gossypium arboreum (tree cotton)
Pathway
gab03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
gab00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
108464487
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
gab03009
]
108464487
Ribosome biogenesis [BR:
gab03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
108464487
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
RuvB_N
AAA_5
AAA_22
TIP49
AAA_16
AAA_2
RNA_helicase
AAA_14
AAA_28
AAA_33
AAA_17
nSTAND3
IstB_IS21
AAA_18
NPHP3_N
Bac_DnaA
Rad17
Nucleolin_bd
Parvo_NS1
ATPase_2
Mg_chelatase
Viral_helicase1
AAA_3
NACHT
TsaE
ABC_tran
NB-ARC
Cytidylate_kin2
AAA_7
Forkhead
AAA_11
BRX
DUF1454
Motif
Other DBs
NCBI-GeneID:
108464487
NCBI-ProteinID:
XP_017620303
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All DBs
Position
13:107633437..107638056
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AA seq
828 aa
AA seq
DB search
MVRRSGGRRSPAGSGVLNRKILSRRLESCQQTHSTVEEIVDHLRTNYPDYKRMKQQPFTI
AVRHALRSSSKCTQNPSPSPSNLNFDADSDEHEHAIAASSSSSPPHSRSRKKARVTDGKE
ERLQHFEELYIEKRRNQRYDSSSNSDTDSSSSSEEVDEGVSTSEDAVYGEKEEPKFDLMK
SMLRQGYNQSNNTKPKLEENNMEMEVAINKTKDKIDMTNGRGTAKKDAKASFTAAADANG
MEVNGKEGPRFRDLGGMKEVLEELKMEVIVPLYHPHLPRWLGVRPMAGILLHGPPGCGKT
KLAHAIANETGVPFYKISATEVVSGVSGASEENIRDLFSKAYRTAPSIVFIDEIDAIASK
RENLQREMERRIVTQLMTCMDESHRLVQPNDKDSSLENSDSKPGYVLVIGATNRPDAVDP
ALRRPGRFDREIVLGVPDENARLEILSVLTGNLRLEGSFDLLKIARATPGFVGADLSALA
NKAGNLAMKRIIDQRKHEFSREPIDDEQADQWWRQPWLPDEMEKLAITMADFEEAAKMVQ
PSSRREGFSSIPNVTWENVGGLDFLRQEFERYIVRRIKFPEEYAEFGVDLETGFLLYGPP
GCGKTLIAKAVANEAGANFIHIKGPELLNKYVGESELAVRTLFSRARTCSPCILFFDEVD
ALTTKRGKEGGWVVERLLNQLLIELDGADQRCGVFVIGATNRPEVMDRAVLRPGRFGKLL
YVPLPSPDERGLILKALARKKPVDESVDLSAIGRMEACENLSGADLSALMNEAAMVALYD
KLSSTETYEASCTIKTCHFERALSKISPSVSDKQKQFYKVLSESFKAG
NT seq
2487 nt
NT seq
+upstream
nt +downstream
nt
atggtaagaagatcgggcggccgccgctcccccgccggttccggcgttctaaaccgcaaa
attctcagccgtcgactcgaatcttgtcaacaaacgcactccaccgtcgaagaaatcgtc
gaccaccttcgaactaactaccccgattacaaacgcatgaagcaacaacctttcacaatc
gctgtccgacatgctcttcgatcctcttccaaatgcacccaaaatccttctccttcacct
tctaatttaaacttcgatgctgatagtgatgaacacgagcatgccattgcagcttcttct
tcttcgtcacctcctcattcacgttctcggaaaaaggctagggtaaccgacgggaaagaa
gaaaggttacagcatttcgaggagttatacattgaaaagagacggaatcagcgctacgat
tcaagctcgaactcggacactgactcatcatcttcatctgaagaagtagatgagggggtt
tcaacttctgaagatgctgtttatggagaaaaagaggaacccaagtttgatttaatgaaa
tcaatgttacgacaaggttacaatcaatccaataacacaaaacccaagcttgaagagaac
aacatggagatggaggttgcaattaataagactaaggacaagattgacatgaccaatgga
cgtgggactgcaaaaaaagatgcaaaggcttcatttacggctgctgctgatgctaatggt
atggaggttaatgggaaagaggggccaaggttcagggatttgggtgggatgaaggaagtg
ttagaggagttgaagatggaagtcatagtgcctctttaccatccacatttgccacgatgg
ttgggagttaggccaatggctggcattctgctccatggcccgcctggttgtggcaagacc
aaactggctcacgccattgccaatgaaactggtgttcctttctataaaatttcagctact
gaggtggtttcgggtgtctcaggtgcatcagaggaaaatattagggatcttttctcaaaa
gcatataggactgctccttcaattgttttcattgatgagattgatgccattgcatctaaa
agagaaaatctgcagagggagatggagcgccgaatcgttacccagttaatgacttgcatg
gatgaatctcatagacttgtgcaaccaaatgataaggattctagtttggagaactctgat
tccaagcccggttatgtgcttgtaattggagctaccaacaggcctgatgctgttgaccct
gcactacgtcggcctggacgatttgatcgtgagattgttcttggtgttcctgatgaaaac
gctaggcttgagatcctttctgtgcttacaggcaatcttagacttgaagggtcttttgat
cttttaaaaatagctagggctacaccagggtttgttggagcggatttgtctgccctggct
aacaaggctggtaatctggccatgaagaggatcatagaccaaagaaagcatgagttttct
agagaaccaatagatgatgaacaagctgatcagtggtggaggcagccttggttgcctgac
gagatggaaaagctagcaatcactatggctgattttgaggaagcagctaaaatggttcaa
ccctcatcaagaagagagggattctcctcaattccaaatgttacgtgggagaatgttggc
ggtcttgatttcctaaggcaggaatttgagcgttacatagttaggcgcattaaatttccc
gaggaatatgcggaatttggagtggacttggagacaggatttttgctttatgggccacca
ggctgtggtaaaacgttgatagcaaaggccgtagctaatgaggctggagccaatttcatt
catataaagggtcctgaacttttgaataaatatgttggagaaagtgagcttgcagttcgg
acattattcagccgtgctaggacatgttcaccatgcatacttttttttgatgaggtggat
gctttgaccacaaagcgcgggaaagaggggggatgggtcgttgagcgacttctgaaccag
ttactcatagagttagatggtgcagatcagcggtgtggtgtttttgttattggtgccact
aacaggcctgaggtgatggatcgtgctgttttacgccctggtagatttggtaaacttctt
tatgtacctctccccagtccagatgaacgtgggttgatcttgaaagctcttgctaggaag
aagccggtagatgagagtgtagatttgagtgccattggacgaatggaggcttgtgagaat
ttaagtggggctgatctttctgcactgatgaatgaagctgccatggttgctttgtatgat
aaactcagttcaacagagacatatgaggcttcatgcacaatcaagacatgccattttgaa
cgtgcactaagtaaaatctcaccatcggtctctgataagcaaaaacagttctataaggta
ttgtcggagagcttcaaagcaggttga
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