Gossypium arboreum (tree cotton): 108464525
Help
Entry
108464525 CDS
T05776
Name
(RefSeq) E3 ubiquitin-protein ligase RING1-like
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
gab
Gossypium arboreum (tree cotton)
Brite
KEGG Orthology (KO) [BR:
gab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gab04131
]
108464525
04121 Ubiquitin system [BR:
gab04121
]
108464525
Enzymes [BR:
gab01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
108464525
Membrane trafficking [BR:
gab04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
108464525
Ubiquitin system [BR:
gab04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
108464525
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
Zn_ribbon_19
zf-C3HC4_2
zf-RING_11
zf-rbx1
zf-C3HC4
zf-RING_UBOX
zf-C3HC4_3
zf-RING_5
zf-ANAPC11
Prok-RING_1
Prok-RING_4
Rad50_zn_hook
zf-RING_Vps41
zf-RING_10
zf_RING_Vps8
zf-Nse
Motif
Other DBs
NCBI-GeneID:
108464525
NCBI-ProteinID:
XP_017620361
UniProt:
A0ABR0ME35
LinkDB
All DBs
Position
13:complement(10709931..10713717)
Genome browser
AA seq
339 aa
AA seq
DB search
MSFDASVHGGGGDANTDGATNKPFFCYQCNRTVTVTIYPSADPSCPLCNEGFLEEYENPS
FENPNPNSNPLSEPFLSVSDPFSSLLPLLFPSSSSTTSSSPSPASIDLHNPNLFGSTRSG
RGDPFAFDPFTFIQNHLNDLRSRGAQIEFVIQNNPSEPGFRLPANIGDYFIGPGLEQLIQ
QLAENDPNRYGTPPASKSAIDALPSVKIAKNNLNSEFNQCAVCMDEFEQGAEAKQMPCKH
LYHKDCILPWLELHNSCPVCRHELPTDDPDYERRVRGAQATGGGNDGDSSGGDNEQRSGD
NRTAERSFRISLPWPFRARGSGSGSGSGDNPQTRQEDLD
NT seq
1020 nt
NT seq
+upstream
nt +downstream
nt
atgtcgttcgacgccagcgtccacggtggcggcggcgacgctaacaccgacggcgcgacc
aacaagcctttcttttgctaccaatgtaaccgtaccgtcaccgtaacaatctacccttcc
gctgacccttcttgtcctctatgcaacgaagggttcctcgaagaatacgaaaaccctagc
tttgaaaacccgaatccgaactcaaacccgttatccgaaccctttttgtcggtatcggat
ccgttctcttccttgctcccgctccttttcccttcctcttcttcaacgacgagttcttcg
ccgtctcctgcttcaattgaccttcataaccctaacttattcgggtcgacccggtcaggc
cggggtgacccattcgctttcgatccatttaccttcatccaaaaccatctcaacgatctc
cgttcaagaggagcccaaatcgaattcgtgatccagaataatccgtccgagccgggtttt
cggcttccagcgaacattggggattatttcatcggaccgggcctcgaacaactgatccag
caactggctgagaacgatccgaaccggtatgggaccccaccagcatcgaaatcggccatc
gacgcgctgccttcggtgaagatagcgaagaataacttgaattcggagttcaaccagtgc
gcggtttgtatggacgagttcgagcaaggggctgaagcgaagcaaatgccctgtaagcat
ctttatcacaaggactgcatacttccgtggctggaattgcataattcctgccctgtttgt
cgtcacgagctgcctaccgatgatcctgattatgagaggagggttcgtggggcgcaggct
actggtggaggtaatgacggcgatagtagtggcggtgataatgagcagaggtcgggggat
aatcggacggcggagaggagttttaggatatcgctgccctggccgtttcgggctcgtggg
tcgggttcaggatcaggatcaggtgataatccgcagaccaggcaagaagatttggattga
DBGET
integrated database retrieval system
