Gossypium arboreum (tree cotton): 108464562
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Entry
108464562 CDS
T05776
Name
(RefSeq) mediator of RNA polymerase II transcription subunit 25-like isoform X1
KO
K15168
mediator of RNA polymerase II transcription subunit 25
Organism
gab
Gossypium arboreum (tree cotton)
Brite
KEGG Orthology (KO) [BR:
gab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gab03021
]
108464562
Transcription machinery [BR:
gab03021
]
Eukaryotic type
RNA polymerase II system
Mediator complex
Other mediators
108464562
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Med25_VWA
Motif
Other DBs
NCBI-GeneID:
108464562
NCBI-ProteinID:
XP_017620408
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Position
13:complement(14320857..14328825)
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AA seq
840 aa
AA seq
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MAEKQLIVAVEGTAAMGPYWHIVVSDYLDKIIRCFCSSELTGQKNSTSNVEFSLVTFNTH
GSYCACLVQRSGWTKDVDIFLQWLSAIPFSGGGFNDAAIAEGLSEALMMFPIASNGNQTP
QNVDGQRHCILVAASNPYPLPTPVYRPQIQNLEQVENSEAQTESRLSDAETVARSFAQCS
VSLSVICPKQLAKLKAIYSAGKQNPRAADPPVDNVKNSQFLVLISENFMEGRAALSRSGL
PSLATNQSPVKMDMASVTSVTGPPPSSVNGSMVGRLPVSVGNVATATVKVEPTTITSMAT
GPAFSHVPSVPRAPSQAIPTLQTSSPLTNTQEGMTSGDNMQELKPSVSGMTQPSRPVPPA
AANVNILNNLSQARVMSSAALTGGTSIGLQSMVQTPVAMHMSNMISSGMASSVPPAHTVL
SSGQPTMTSLTGSGALTGTAQVLPNSGLSSFSSATSNVAGNSNIGISQPMGNVQGAVNIG
QSVPGMSQGNHSGTQMMQSGVGMSQNMSALGQSTVSSGNGTMIPTPGMSQQVQSGMQALG
VSNSSAASMPLSQQTSSALQSAQSKYVKVWEGNLSGQRQGQPVFITRLEGYRSASASETL
AAHWPQTMQIVRLISQDHMNNKQYVGKADFLVFRAMNQHGFLGQLQEKKLCAVIQLPQQT
LLLSVSDKACRLIGMLFPGLHSSNTPPGLHPSLDKPKKLNEMDMVVFKPQMSSQQQLQLQ
QQQMQPQLQQQQQQQNPQLQQQQLPHLQQQQLPQLQQQQQQQQLSQLQQQQQQQQQQQQQ
QQQQSQHPQMQQQQLSQQQQMVGSGMGPAYVQGPGRSQLVSQGQVSSQAPPNMPGGGFMS
NT seq
2523 nt
NT seq
+upstream
nt +downstream
nt
atggcggagaagcagctaatcgtggccgttgaaggcactgcagccatgggtccctactgg
catatcgtcgtctctgattacctcgacaagatcatcaggtgtttctgtagtagtgagttg
acggggcagaagaactctacatctaatgttgagttttcattggtcacattcaacactcat
ggatcatattgtgcttgcctagtacagcgtagcgggtggacaaaagatgttgatattttc
ttacaatggctgtcggccatacctttttctggtggtggtttcaatgatgctgcaattgcc
gaagggctgtctgaagcactgatgatgtttcctattgcttcaaacggaaaccaaacacca
caaaatgtggatgggcaaagacattgcattcttgttgctgccagtaatccctatcccttg
cctacaccagtctatagacctcaaattcaaaatttggagcaagtcgaaaattctgaagcc
cagacagagagtcgtctgtctgatgctgaaacagtagctagatcatttgctcagtgttct
gtttctttatctgtgatatgtccgaagcagcttgcaaagctaaaagcaatctacagtgct
ggaaagcagaacccccgtgcagcagatccaccagttgataatgttaaaaactctcagttt
cttgttctgatttcagagaactttatggagggccgtgctgctttaagtcgctctggactt
ccaagtttggcaaccaatcagagtcctgtgaaaatggacatggcttctgtcacttcagtt
acaggaccacctccatcatcagtgaatggatctatggtgggcaggctacctgtttctgtt
ggaaatgttgccactgctactgtaaaagttgagcccacaacgataacatccatggcaact
ggacctgcattttcacatgttccctctgttccacgtgcgccttctcaagcaatcccgacc
ttgcaaacctcttcgccattgacaaatacacaggaggggatgacaagtggtgacaacatg
caagaactaaaaccttctgtaagtggcatgacacaaccttcacgtcctgtgcctccagct
gctgcaaatgtgaacatactaaacaatctttctcaagcacgggttatgagctctgctgct
ctcactggaggaacttctataggacttcaatcaatggttcaaacaccagtggccatgcat
atgtccaatatgatatctagtggaatggcatcctctgtgcctccagctcatactgtatta
tcatctgggcaacctactatgacttcattaactggctcaggagctcttacggggactgca
caggtcctaccaaactcaggtcttagttcattttcttctgcaacttcaaatgtggctggg
aattcaaacattggaatttcacagccaatgggcaatgttcaaggagcagtgaatataggc
caatcagtacctggcatgagccaaggaaaccattcaggcacccaaatgatgcaaagtgga
gttggcatgagccagaacatgagtgcccttggtcaatcaactgtctcttctggaaatggc
acaatgattcctactccaggcatgtctcaacaagtacagtctggaatgcaggcacttgga
gtgagcaacagttcagctgccagtatgccactatcacaacagacgtcaagtgctttgcaa
tcagcacaatccaaatatgttaaagtctgggagggaaatttatctggccagagacaaggg
cagccagtctttatcaccagattggaaggttatcggagtgcctcagcttctgagacactt
gcagcacattggccacaaaccatgcaaatagttcgtcttatatctcaggatcacatgaat
aacaagcaatatgttgggaaggcagattttttagttttcagggcaatgaatcagcatgga
tttcttggacagctacaagagaagaagctttgtgctgtaattcagttgccacaacagaca
ttgctgctttcagtttctgacaaagcctgccgcttgataggaatgcttttccctgggcta
cacagttccaacacgccaccaggcctccacccctctctagacaaaccaaaaaaattaaac
gaaatggatatggttgtctttaaaccacaaatgtccagccaacaacagctgcaattgcag
cagcagcagatgcagccccagttacagcagcagcaacagcagcagaatccacagctgcaa
caacagcagcttccgcacttgcagcagcaacaactccctcagctacaacaacaacaacag
cagcagcagctttcccagctgcagcagcaacaacaacaacagcagcagcagcagcagcag
cagcaacaacagtcgcaacaccctcagatgcagcaacagcaactttctcagcaacaacaa
atggttggttcaggaatgggtcctgcttacgttcaaggtccaggacgatcacaattagtt
tctcaggggcaagtttcatcacaggccccacctaatatgccaggagggggatttatgagt
taa
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