Gossypium arboreum (tree cotton): 108465039
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Entry
108465039 CDS
T05776
Name
(RefSeq) fanconi-associated nuclease 1 homolog isoform X1
KO
K15363
fanconi-associated nuclease 1 [EC:3.1.21.-
3.1.4.1
]
Organism
gab
Gossypium arboreum (tree cotton)
Pathway
gab03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
gab00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
108465039
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gab03400
]
108465039
Enzymes [BR:
gab01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.1 phosphodiesterase I
108465039
DNA repair and recombination proteins [BR:
gab03400
]
Eukaryotic type
DSBR (double strand breaks repair)
FA (Fanconi anemia) pathway
Other FA pathway factors
108465039
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VRR_NUC
FAN1_HTH
FAN1_TPR
HIRAN
Sgf11
DNA_ligase_ZBD
Motif
Other DBs
NCBI-GeneID:
108465039
NCBI-ProteinID:
XP_017620831
UniProt:
A0ABR0QKH2
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All DBs
Position
3:complement(64701005..64715385)
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AA seq
951 aa
AA seq
DB search
MLTGRESLSRLIGKRRRFLPNLQSILFSPIRSSLNLLSDKNGGLTETESSKGKVEISSSD
LVTCPVCGSKVRGEDYTINSHLDRCLSRRTKRKLTQRTLLELNFGCSQSKLQISSDESER
LLSSDLRKNCSDCEENVTRCFSKIDPREEKSHDQCRQLPHTESVKQIDVAGSAENPISDG
RANTMVYFSALSTDNEESRNHMDGTVDSISGMAIDTFIVGRKFSDEKEVNLGANISLLRD
PDNIKDSNAIKVLSASSACCKVLGYLPLELAQYLSPLIEKYCLSFEGYVISVPKRSLDAV
PIQIVCQNIIFNGKNGCDEFEALHLWQKALQVVEFAKNRPPNTTKYQQNFCLLLKEVLTS
SPHLFTKDEKKFIESFTSLSEDSQRLFVRLYTRKGPWFRLSTIMYPEICNPQQAVKELSA
AGYLYLFEDTTKLHDDEMKDLLSLLTVSELRDILCTLRKKCNHGSRKQNLIASLLSCYKG
GSCPVLQRLIWDRTEICIRASPEAESLFWRAERLFFLNGEQDLSAFLLVDLRIVKYPTYN
CIILEQIFSNESDLLAYEEAIEVAQVIDQSLDENNFELVLRCIMIADSRISCCPEKLIDS
TSPDLMAIFRSCFSASWVYSKVILLGISFLECERRYKDAIHLLRRLLDCFTCDARRGYWT
VRLSVDLEHIGCPNESLSVAEAGLLDPWVRAGSRMALQRRVLRLAKPPRRWKTPSFSESL
KRKIIEVHIQGRPLNCEAGRKSRFYGEDGEQCGVEQLALQYYATEGGWQGVHTESGIWMT
IFGLLMWDILFSDVPNVFRTRFQTAPLDMDTDHFYLARKSLIEPQLQKIHDGLAEEILIT
SWELHMGTACRGVNWDQHSLSDLRAAVSCIRGPCLASLCRHLAQDYRSWLSGMPDLLLWR
FHGDYKGEAKLVEVKGPRDQLSEQQRAWLLLLMDCGFNAEVCKVSPTVASP
NT seq
2856 nt
NT seq
+upstream
nt +downstream
nt
atgctaactggaagagaaagtttaagcagattgatcggcaagcgccgccgttttcttccc
aaccttcaatctattctcttttcgcctatccggagctctttgaatctattgtctgataaa
aatggaggcttgactgaaactgaatcttccaaaggcaaagttgaaatatccagttctgat
ttggtaacttgccctgtttgtgggagcaaagttcgtggtgaagattacactatcaattct
catctggacagatgtctttctagaagaaccaagcggaagctgacacagcggacacttctg
gaattaaactttggttgctctcagtcaaagcttcaaatttcctcggatgaatcagaacgg
ctgctgagtagtgaccttaggaagaattgttctgactgtgaagagaatgtcactcgttgc
ttctcgaagattgatccaagagaagaaaaaagccatgatcagtgcagacaattgccgcat
actgagagtgttaaacaaattgatgtggctggttctgcagaaaatccaatcagtgatgga
agggcaaacaccatggtttacttttctgcattgtccactgataatgaggagtccagaaat
catatggatggaactgtggacagcatatctgggatggctattgatacttttatcgtcggt
cgtaagtttagtgatgaaaaagaggtgaatctaggggcaaacatatctcttctgagagac
cctgataatattaaggattcaaatgctatcaaggttctttctgcaagttctgcatgctgt
aaagtgcttggttatctccctctagagttagctcagtatttatctcctctgattgaaaag
tactgcttgagctttgaggggtatgtgatatctgttcctaaacgttctcttgatgctgtt
ccaattcagattgtgtgtcagaacattatatttaacggtaaaaacggatgtgatgaattt
gaggctttacatttgtggcaaaaagctcttcaagtagttgaatttgcaaagaaccgccca
cctaatacgacaaaatatcagcaaaatttttgtttgttactaaaggaggttctaactagt
agccctcaccttttcacaaaagatgaaaagaaattcatcgaatcattcacttcattatca
gaggatagtcagaggctttttgttcgactttatacacggaaaggaccttggtttcgattg
tctaccattatgtaccctgaaatatgtaatcctcaacaagctgtcaaggagctgtctgca
gctggctatctgtatctctttgaagatacaactaaactacatgatgatgaaatgaaggac
cttttgagtctgctcactgtttctgagcttcgtgacattttatgtacacttagaaagaaa
tgtaatcacggatcaagaaagcaaaatcttattgcatctcttctttcctgctataaaggt
ggatcatgccctgttctacaacggttaatttgggacagaaccgagatttgtattagggca
tctccagaagctgaatcccttttttggcgtgctgagaggcttttcttcctaaatggagaa
caggatctgtcggcattcctactggtggatctcaggattgtcaagtatcctacttacaac
tgcataattttagaacagattttctcgaatgaaagtgacttacttgcatatgaagaggcc
attgaagtggctcaagtaattgatcagtctcttgatgaaaacaactttgagttggtttta
agatgcatcatgatagctgattcccgtatatcctgctgtcccgagaaattgattgattcc
acaagtcctgatttaatggctatatttcgatcatgcttctcagcatcatgggtgtattct
aaagtaatcttgcttggaatttccttccttgagtgtgagcgtaggtacaaggatgcgata
catttactaaggcgattgcttgattgcttcacctgtgatgcaagaaggggatattggacc
gtaagattatctgttgatttggagcatattggctgccccaatgagagtctttcagtcgct
gaggctggattattagatccttgggttcgtgccggttcaagaatggcactacaaaggcga
gttcttcgcttggcaaaaccacctaggcgctggaaaactccaagcttttcagaatctctt
aagaggaagataatagaggttcatattcaagggagaccattgaactgtgaagctggtaga
aaaagccggttctatggggaagatggggagcaatgtggagtagaacagttagctctacag
tattatgcaacagaaggtggatggcagggtgtccatacagagagtggtatatggatgact
atcttcgggcttctcatgtgggatattttattttcagatgtaccaaatgttttccgcacc
agattccagactgctccattggatatggatactgatcatttttatctggcaagaaagagc
cttatcgagccccaactacaaaaaatccacgatggtttggctgaagagattctcataaca
tcatgggaattgcatatgggaacagcttgtagaggagttaattgggaccaacactccctt
tccgaccttcgagcagctgtttcatgtatcagaggtccttgtttggcctctctatgtaga
catctcgctcaggattaccgcagttggttgagtggaatgcctgatttgttgctctggcgg
ttccatggggactacaaaggtgaagccaaactcgtcgaggttaagggccctagagatcaa
ctctccgaacaacaaagagcatggctgctgcttctaatggattgtggattcaatgcggag
gtttgtaaagtgagccctacagtagcatccccttga
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