KEGG   Gossypium arboreum (tree cotton): 108465161
Entry
108465161         CDS       T05776                                 
Name
(RefSeq) UBP1-associated protein 2C-like
  KO
K12741  heterogeneous nuclear ribonucleoprotein A1/A3
Organism
gab  Gossypium arboreum (tree cotton)
Pathway
gab03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:gab00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    108465161
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:gab03019]
    108465161
   03041 Spliceosome [BR:gab03041]
    108465161
Messenger RNA biogenesis [BR:gab03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     108465161
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     108465161
Spliceosome [BR:gab03041]
 Common components
  Common spliceosomal components
   hnRNP proteins
    108465161
SSDB
Motif
Pfam: RRM_1 RRM_7 RRM_Nup35 Cut8
Other DBs
NCBI-GeneID: 108465161
NCBI-ProteinID: XP_017620973
UniProt: A0A0B0NHP7
LinkDB
Position
4:52869035..52873592
AA seq 338 aa
MEDLKKRKMEEMEEMGNNDQLSTQEELRSLLDPLAKSQLVDLLSRLGSQYPSIAEEIKSI
ASSDPVHRKLFVRGLAWNTTSETLCAAFRMHGEIEEGAVIYDKATGKSRGYGFVTYKHME
SAHSALGAPSKLIDGRMAVCNLACEGLTGASTTPDLAQRKLYIGGLSPDVTSEMLLNYFG
RHGEIEEGSVAYDKDTNESRGFGFVTYKTIEAAKKAIDDPQKILGGRTIIVKLADTHKGK
PVQTQAPAAAVVPLAMPMAPGYPQLGKAHPSATPAGYAYTQPVAPYQASSYSSPAAAPAP
YPSQSTIPYASIAAKKDPQGIPPTTPMGMSGYPYYIGK
NT seq 1017 nt   +upstreamnt  +downstreamnt
atggaggatttgaagaagagaaagatggaagagatggaagagatgggcaacaacgaccag
ttatcaactcaagaagagctacgttctttgcttgaccctcttgctaaatcccagctcgtc
gatcttctttctagactagggtcccaatatccttcgattgctgaagaaattaaaagtatt
gccagttcagatcctgtacatcgaaagctttttgttcgtggcttagcctggaataccact
tcagaaaccttgtgtgctgcatttcgaatgcatggagaaatagaagaaggggctgtcatc
tatgacaaagccactggaaaatctcgtggctatggtttcgttacttacaaacacatggag
tcagcgcatagtgcacttggagcacccagcaaacttattgatggccggatggctgtatgt
aatttagcttgtgaagggttaactggagcaagtaccacacctgatctagctcaaaggaag
ctctatattgggggcctatcaccagatgtcacaagtgagatgctcctgaattattttgga
agacatggtgagattgaggaaggctcagttgcatatgacaaagatacaaatgaatcacgt
ggatttggttttgttacatacaagacaatcgaggctgcaaagaaggccatcgatgaccca
caaaagatccttggggggagaactatcattgtgaagcttgctgatacccacaagggaaaa
cctgtacaaacacaggcacctgctgcagctgtggttcctcttgcaatgcctatggcacct
ggctacccacagctcgggaaagcacacccctctgccacccctgctggctatgcttatact
caacctgtagcaccatatcaagcttcttcgtattctagtcctgctgcagcacctgcacca
tacccaagccaatcgacaattccttatgcatcaattgctgcaaagaaggatccacaagga
atcccaccaactacccccatgggaatgagcggttacccatattatattgggaaataa

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