KEGG   Gossypium arboreum (tree cotton): 108465185
Entry
108465185         CDS       T05776                                 
Name
(RefSeq) protein HIRA-like isoform X1
  KO
K11293  protein HIRA/HIR1
Organism
gab  Gossypium arboreum (tree cotton)
Brite
KEGG Orthology (KO) [BR:gab00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:gab03036]
    108465185
Chromosome and associated proteins [BR:gab03036]
 Eukaryotic type
  Nucleosome assembly factors
   Histone chaperones
    Other Histone chaperones and regulators
     108465185
SSDB
Motif
Pfam: Beta-prop_CAF1B_HIR1 Hira WD40 WD40_CDC20-Fz WD40_Prp19 WD40_WDHD1_1st Beta-prop_EML_2 Beta-prop_TEP1_2nd EIF3I ANAPC4_WD40 Beta-prop_IFT122_1st WD40_MABP1-WDR62_2nd WDR55 Beta-prop_RIG_2nd Beta-prop_WDR35_TULP_N NBCH_WD40 Beta-prop_IFT140_1st Beta-prop_WDR90_POC16_2nd Beta-prop_WDR19_1st Beta-prop_HPS5 Beta-prop_EML Beta-prop_SCAP WD40_MABP1-WDR62_1st
Other DBs
NCBI-GeneID: 108465185
NCBI-ProteinID: XP_017620997
LinkDB
Position
8:141581045..141587308
AA seq 1028 aa
MIAEKPSWVRHEGMQIFSIDIQPGGLRFATGGGDHKVRVWNMESVGRNLGKDESTLRLLA
TLRDHFGSVNCVRWAKHGRFVASGSDDQAILIHERKPGSGTTEFGSGEPPDVENWKVAMT
LRGHTADVVDLNWSPDDSMLASGSLDNTIHVWNMSNGICTAVLRGHSSLVKGVAWDPIGS
FIASQSDDKTVIIWRTSDWSLAHRTEGHWAKSLGSTFFRRLGWSPCGHFITTTHGYQKPR
HSAPVLERGEWAATFDFLGHNAPVIVVKFNHSMFKRNSANSQEAKATPVGWVNGAAKIGG
KESQPYNVIAIGSQDRTITVWTTASPRPLFVAKHFFGQSVVDLSWSPDGYSLFACSLDGT
VATFHFEVKELGHRLSDAELDELKRSRYGDVRGRQANLAESPAQLLLEAASAKQTTSKKV
ALDVQQNQIPVKSSLDLGVTNKSSKPPNNDGKKSGLSASDGLTKPVTSARVTSPVKQREY
RRADGRKRIIPEAVGVPTQQENISGGAQSQALDFPVASSDPRKNDNGIVPADGGLREATS
RGTVGKNFDLKECSGVTARATITDSLVIEKVSAGQDHSINVEQSGSLKPSGSTTGSTKSL
SIRVFDEKEGNDLTPVCLEACPKEHAVTDIVGAGNACMTKETAIICTRGGQTLWSDRISG
KVSVLAGNANFWAVGCEDGCLQVYTKCGRRALPTMMMGSAATFIDCDESWKLLLVTRKGS
LYLWDLLNRNCLLRDSLASLITLDHNSSTKGTIKVISVKLSKSGFPLVVLATRHAFLFDT
SLMCWLRVADDCFPASNFASSWNLGSTQTGELASLQVDVRKYLARKPGWSRVTDDGVQTR
AHLEAQLASSLALKSPNEYRQSLLSYIRFLAREADESRLREVCESFLGPPTGMASDSKNP
AWDAYVLGMKKHKLLREDILPAMASNRKVQRLLNEFMDLLSEYASIENNLDQRDPSPLTV
SQPEIDPMDSNPATCQTDTVEPTTDKKENPSPGIIDQMDSILSNQVNSGTKSSDQVNQAP
TIEDPAGS
NT seq 3087 nt   +upstreamnt  +downstreamnt
atgattgctgagaaaccaagttgggttaggcatgaaggaatgcagattttctccattgat
attcaacctggtggtcttaggtttgctactggtggaggtgaccataaggttagagtatgg
aacatggaatctgttggcaggaatttgggaaaggatgaatctacattgaggcttcttgca
actttgcgtgatcatttcgggtcggtgaactgcgttaggtgggctaagcacggtcggttc
gttgcgtcagggtctgatgatcaagcgattctaattcatgagagaaagcctggttccggg
acgaccgagttcggtagtggggagcccccggatgttgagaactggaaagttgcgatgacg
ttgaggggacacactgcggatgtggtagatcttaattggtcgcctgatgactcgatgttg
gctagtgggagtttggacaacactatccacgtatggaatatgagtaacggtatctgcacg
gctgtgcttaggggtcattctagtctggttaaaggagttgcctgggatcccattgggtcc
ttcatagcgagccaatctgatgacaagaccgttattatatggcgaacaagtgactggagt
cttgcccatagaacagagggccactgggcaaaatcactgggatctacatttttcaggcgg
cttggatggtcaccttgtggtcatttcataactaccactcatggttaccaaaagccaagg
cattccgcacctgttcttgagagaggggaatgggctgcaacgtttgacttcttaggccac
aatgcaccggttatcgtagtgaagtttaatcactcaatgttcaaaagaaattcagccaat
tcgcaggaagcgaaagccactcctgttggctgggtgaacggagctgctaagattggcggg
aaagaatcacagccatataatgtaattgcaattgggagtcaggaccgcactataactgta
tggacaactgcaagtcctcgcccactctttgttgccaagcatttctttggtcaaagtgtt
gtggatttatcatggagccccgatggctattctctctttgcttgttcattggatggaact
gtggctactttccatttcgaagtgaaagaactgggccacaggttaagtgatgccgaactt
gatgagttaaagaggagtcgttatggtgatgtaagaggtcgacaggcaaatttggcagag
agcccggcacagttattgctcgaagctgcttcagccaagcaaaccactagtaagaaagta
gctttggatgttcagcagaatcagatacctgtaaaatcatctcttgacttgggggtaaca
aacaaaagttccaagccaccaaacaatgatggaaagaagagtgggctttccgctagtgat
ggattaactaaaccggtgacgtctgctcgggttactagccctgtaaaacaaagagaatac
agacgtgctgatggtagaaagagaatcattcccgaagccgtcggcgttcctactcagcag
gagaatattagcggcggtgctcagtctcaagcattagatttccctgttgcatcatctgat
ccccgaaaaaatgataacggcatagttcctgctgatggtggtttgagagaagctactagc
aggggaaccgttggcaaaaattttgacttaaaggagtgctcaggggttactgctcgggct
actattactgacagtctggttattgaaaaagtttctgctggccaagatcatagtatcaat
gtagaacagtctggaagcttgaaaccatcaggttccaccaccggctctaccaaatctctc
tcgattagggtatttgacgaaaaagaagggaatgatttgactccggtttgcttggaagcg
tgtcccaaggaacatgctgtgaccgacattgttggtgcgggaaatgcatgtatgactaaa
gaaacagcaatcatctgcacaagagggggtcaaacactttggtctgatcgtatatcagga
aaagtttcggtcttagccggaaatgcaaacttttgggctgtcggatgtgaagatgggtgt
ttacaggtttatacaaagtgtggaagacgtgcattgccgaccatgatgatgggatctgct
gcaacctttatagattgcgacgagagctggaaattattattggtgacgaggaaaggatct
ttgtatttatgggatctcctgaataggaattgtctcctccgtgattcattggcatctcta
atcactttggaccataactcgtctacaaaaggcacaatcaaagttatatcagtgaagttg
tcgaaatctggttttcctctcgttgttttggccactcggcatgcgtttctctttgacacg
agtctaatgtgttggctgagggtcgctgatgactgcttcccggcatcaaattttgctagt
tcttggaatttgggttcaactcagactggtgagctggcctcgctgcaggtggatgtaagg
aaatatttggccagaaaaccgggctggagtagggtaaccgatgatggagtacaaacgcgt
gctcatttagaagctcaattggcatcgtctttggctctgaaatccccaaacgaataccgc
cagagccttctttcctacatacgcttccttgcaagagaagcggatgagtctcgattacga
gaagtctgcgaaagttttcttggtccaccaaccggaatggcttccgattccaagaaccct
gcttgggatgcatatgtgctcggaatgaaaaagcacaaacttttaagagaagacattctt
ccagcaatggcatcgaataggaaagtccaacgattacttaacgagttcatggatctcctc
tccgaatatgcaagtatcgaaaataacttagaccaaagagacccatctccactgaccgta
tctcaaccagagattgacccgatggactccaaccctgcaacctgccaaacggatactgtt
gagccaacaacagataagaaggaaaacccgtcccccggtataatagatcaaatggattct
attctatcgaatcaagtaaactcgggtaccaaatcttccgatcaagtaaatcaagctcca
acaatagaagatcctgctggttcataa

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