Gossypium arboreum (tree cotton): 108465227
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Entry
108465227 CDS
T05776
Name
(RefSeq) uncharacterized protein LOC108465227
KO
K15559
regulator of Ty1 transposition protein 103
Organism
gab
Gossypium arboreum (tree cotton)
Brite
KEGG Orthology (KO) [BR:
gab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gab03021
]
108465227
Transcription machinery [BR:
gab03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
108465227
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CID
CTK3
TEX13
CENP-K
Stathmin
Motif
Other DBs
NCBI-GeneID:
108465227
NCBI-ProteinID:
XP_017621038
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Position
11:66273381..66278159
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AA seq
526 aa
AA seq
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MNSIFSEQILADKLSKLNSTQQCIETLSHWCIFHQSNAELVVATWDKQFHNSEMAQKVPL
LYLANDILQNSKRKGNEFVNEFWKVLPAALKDLLENGDDRGKNVVSRLVGIWEERRVFGS
RARSLKDVMLGEEVPPPLELSKKRPRSASVRIVKRDSRSIKTKLSIGGTAEKIVSAFHLI
LSEQPNEDEEMSKCKSAVHRVRRMEKDVDVACSIAKDPKRKTLSKELEDEEKLLKECIEK
LKSVEANRAALVSQLKEALREQESELENVRTQMQVAQAQADEAFNMRKRLSDEDFVSTSS
TTMVLSIDANAKAGETPKRSAAAIAAEVADKLAASSSSQMIMHSVLSTFAAEEAKNVGLT
KASTQSNSLNSVTDAISKSEKSLPVADSTALMQAQPLCAPINHSYQSVLVPQPAMQSQTT
SSQPQYHMLPNIAAQQFLQSSGTLTPYGTYGGMPPLPPGPPPPPPYMVSPMLPLPITQQQ
PIPSGQQTASLTQQQLLPVTQQPPVPPSFRPLQSPGMVYYGHPPHS
NT seq
1581 nt
NT seq
+upstream
nt +downstream
nt
atgaatagtatattcagtgaacagatacttgcagataagctttccaagctcaacagcact
caacagtgtattgaaacattgtcacattggtgtatatttcaccaaagcaacgcagaactg
gttgttgcaacatgggataaacagtttcacaactcagagatggctcagaaagtccccttg
ttgtaccttgccaatgatattctgcagaacagcaagcgtaaaggaaatgaatttgttaat
gagttctggaaagtccttcccgcagccttgaaggaccttcttgagaatggtgatgatcgc
gggaagaatgtggtttccagattggtaggtatatgggaagaacgaagagtatttgggtcc
cgagcacgaagcctaaaagatgtgatgcttggtgaagaagtgcctccgccattggaatta
agcaaaaagcgtccacgctctgcatctgtcagaattgtgaagcgggactcaagatccatt
aaaacgaagttgtcaattgggggcacagctgaaaaaatagtttcagcatttcatttgata
ctcagtgaacagccaaatgaggatgaagagatgagcaagtgcaagtcagcagttcatcga
gtgaggaggatggaaaaagatgtggatgttgcctgttcaattgcaaaggatccaaaacgg
aaaaccttgtccaaagaacttgaagatgaagaaaaacttctgaaagaatgcattgagaaa
ctcaagtctgtggaagcaaatagagcagcacttgtatcacagttaaaagaagctcttcgt
gaacaggaatcagagttagagaatgttcgtacacagatgcaggtagcacaagcacaggcg
gatgaagcctttaacatgcggaagcgtctcagtgatgaggattttgtttcaacgtcatct
actacaatggtcctatcaattgatgccaatgcaaaagctggagaaacacctaagcggagt
gctgcagccattgcagctgaggttgcagacaagcttgctgcttctagctcctctcagatg
atcatgcattctgttctctctacatttgcagctgaagaagccaaaaatgttggtctaaca
aaggcgtccacacagtcaaactccctcaattctgtcaccgatgcaatttcaaaatcagag
aagtcactgccagttgcagattctactgctcttatgcaagcacaaccactatgtgctcca
ataaaccattcttatcaatccgttcttgtgcctcaaccggccatgcaaagccaaaccact
tcctctcagcctcaatatcacatgcttcctaacatagctgcacaacaatttttgcagtca
tcagggacactaaccccatatggtacttatggtggtatgccacctttgccacctggacca
ccaccgccgccgccctacatggttagtccaatgttaccattgccaataactcagcagcag
ccaataccatccggtcagcagacggcctctttgacccagcagcaactgctgcctgtaact
cagcaaccacctgtacctcccagtttccggcctcttcagtcaccgggaatggtgtactat
ggtcatccgcctcattcatag
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