Gossypium arboreum (tree cotton): 108465374
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Entry
108465374 CDS
T05776
Name
(RefSeq) uncharacterized protein LOC108465374
KO
K11864
BRCA1/BRCA2-containing complex subunit 3 [EC:3.4.19.-]
Organism
gab
Gossypium arboreum (tree cotton)
Pathway
gab03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
gab00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
108465374
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
gab01002
]
108465374
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
gab04121
]
108465374
03036 Chromosome and associated proteins [BR:
gab03036
]
108465374
03400 DNA repair and recombination proteins [BR:
gab03400
]
108465374
Peptidases and inhibitors [BR:
gab01002
]
Metallo peptidases
Family M67
108465374
Ubiquitin system [BR:
gab04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
108465374
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
JAMM
108465374
BRISC complex
108465374
Chromosome and associated proteins [BR:
gab03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
BRISC complex
108465374
DNA repair and recombination proteins [BR:
gab03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-A complex
108465374
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRCC36_C
JAB
Prok-JAB
UPF0172
Motif
Other DBs
NCBI-GeneID:
108465374
NCBI-ProteinID:
XP_017621197
LinkDB
All DBs
Position
6:78441209..78447825
Genome browser
AA seq
435 aa
AA seq
DB search
MSLTCVKMSEDVWLTCLTHALSTETEEIMGLLLGDIEYSKDGNVTALIWGASPQSRSDRR
KDRVETNPEQLAAASAQADRMTASTGRTTRVIGWYHSHPHITVLPSHVDVRTQAMYQLLD
SGFIGLIFSCFSEDTNKVGRIQVIAFQSSDGKQNHVTGPIALSPLNRSSVIDLESSLSSS
ENPLLTSGSAEVDSHMQDTSDSRPAQGSAKSGIRSVDLGGFFANADASYLGQEQGRGYYN
TNNIQNAVVDIDPMDMSESMQEAMHRSNLDMSGAEYVRKEIPLHVLPTSSLVNLDSPLKS
FTDLQRVLYEEERAAYNQAILQTMRDGKVHPLSFIHHTSTYQASMCKLIEYCLSPAISAL
QDRLKENEIRLALLTDEAQMLETEASKGSGPSSPHTVSHGFRGSASVGQRDLHSSTEPIS
MRTFSGPESRSRKRS
NT seq
1308 nt
NT seq
+upstream
nt +downstream
nt
atgtctttaacatgtgtgaaaatgtctgaggatgtttggttaacttgtcttacacatgca
ttgtccactgaaactgaagagatcatgggtcttcttctcggtgatattgagtactcaaaa
gatggaaatgtcactgcattgatatggggagcgtcaccacaatcacgatctgatcggcgg
aaggaccgagttgagacaaatcctgaacagttggcagctgcatcagctcaagctgataga
atgactgcatcgactggcagaacaacacgagttattgggtggtaccattcacatccccat
attactgttcttccttctcatgttgatgtgcggactcaggcaatgtatcaacttctagat
tctggatttattgggctcatattttcttgttttagtgaagatacaaacaaggtgggaaga
atacaagtcattgcttttcagtcatcagatgggaaacagaatcatgttacaggaccaatt
gctttatcaccactgaatagaagctcagttatcgatcttgagtcatctctaagctcttct
gaaaatccattgttgacatctggatctgcagaagtagatagtcacatgcaagacactagt
gattccagaccggctcaaggatctgccaagagtgggatacgatctgtagacttaggaggt
ttcttcgccaatgctgatgccagctatctagggcaagagcaaggcagaggttactacaat
accaataatatacagaatgctgttgttgatattgatcccatggatatgtcggaaagcatg
caagaagccatgcaccgctcaaatttggacatgagtggtgcagagtatgtccgaaaagaa
attcctctgcatgttttgccaacatcttctcttgttaatcttgactcaccattgaagtca
ttcacggatttgcaacgtgtactatatgaagaggagcgggctgcgtataaccaagccatc
ttgcaaactatgagagatggcaaagtgcatcccctttctttcattcatcacacgtctaca
tatcaggcttcaatgtgcaagttaattgaatattgtttaagtcctgccatcagtgcactt
caggatcggctaaaagagaacgaaattcggttagcattgttgacggatgaagctcagatg
ttggagaccgaagcctccaaggggagtggaccaagttctccacacacagtgtcacatgga
ttccgaggaagcgcttcagttggccagagagatttgcatagttcaactgaacccatcagc
atgaggacattttctggtcctgagagcagaagcagaaagcggtcttaa
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