Gossypium arboreum (tree cotton): 108465390
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Entry
108465390 CDS
T05776
Name
(RefSeq) E3 ubiquitin-protein ligase ATL6-like
KO
K10664
E3 ubiquitin-protein ligase ATL6/9/15/31/42/55 [EC:
2.3.2.27
]
Organism
gab
Gossypium arboreum (tree cotton)
Brite
KEGG Orthology (KO) [BR:
gab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
gab04121
]
108465390
Enzymes [BR:
gab01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
108465390
Ubiquitin system [BR:
gab04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
ATL proteins
108465390
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-RING_11
zf-rbx1
zf-C3HC4_2
Prok-RING_1
zf-C3HC4
zf-ANAPC11
zf-RING_UBOX
zf-RING_5
zf-RING_16
zf-C3HC4_3
zf_RING_Vps8
zf-Nse
zf-RING_Vps41
Motif
Other DBs
NCBI-GeneID:
108465390
NCBI-ProteinID:
XP_052878874
LinkDB
All DBs
Position
12:complement(59351407..59352744)
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AA seq
320 aa
AA seq
DB search
MFNLSRSIFLYLLTVVVVTAQSTAPPPRGDSYRLYSHFDPTMAIVVMVLVGAFFFVWILS
IYIRHYDESYPIAPAAAASSAQRFRPSGLYPEVIENFPVFLYSHVKNLKIGKRALECAVC
LSEFEDDEALRVIPKCCHVFHLDCIDAWLAYHVTCPVCRAKLSPDSDDIALPVELGSDTT
ESDNNNTESSHPTRQRIEQQNELVIHVDEETRPREKITGKFTRSHSTGHSMIQPGENTER
FPLRFAEEFRKQIAKRGVEAGKTPPFVSKTGPLKSPKGGGGDWDDGSHSWRGLTSVEEKL
YCLNLKAELGEKGSSPRPSI
NT seq
963 nt
NT seq
+upstream
nt +downstream
nt
atgtttaatctcagccgttcgattttcttgtacttactaaccgtcgtcgtagtgacggca
cagtcgacagctccaccaccaaggggagactcgtaccgtctttacagtcatttcgacccc
acgatggccatcgtcgttatggtcctcgtcggcgctttcttcttcgtctggatcctctcc
atttacatccgtcattacgacgaatcttacccgatcgcccccgccgctgcagcttcctct
gctcaaaggttccggccaagcggtctttatccggaggtgatcgagaatttccccgttttt
ttatattcccatgttaagaaccttaaaattggtaaacgggcgctggaatgcgcggtttgt
ttgagtgagttcgaagacgatgaagcgctgcgtgtaattccgaaatgctgtcacgtgttt
catcttgattgtatcgacgcttggttggcttaccacgtgacctgtcctgtttgtcgagct
aagctcagccccgattccgatgacatagctctaccggtagagttaggctccgacaccact
gagtcggacaacaacaacaccgagtcgagtcatccgacaagacaacgaattgagcagcaa
aatgagttggtcattcatgtcgacgaggaaacgagaccgagagagaaaataacggggaag
tttacacgttctcactcgacgggtcactcaatgattcaacctggggagaacacggaaagg
tttccgttaaggtttgcggaggaattcaggaagcaaattgcgaaaaggggggttgaagcg
ggcaagacaccgccgtttgtttcgaagacgggtccgcttaagtctccgaaaggtggcggt
ggagattgggacgatgggtcccattcatggagaggattaacgtccgttgaagagaagcta
tattgtctcaacttgaaagctgagctaggtgaaaaaggttcctcgcctcggccttccatc
taa
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integrated database retrieval system
