Gossypium arboreum (tree cotton): 108465476
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Entry
108465476 CDS
T05776
Name
(RefSeq) RNA pseudouridine synthase 2, chloroplastic isoform X1
KO
K06180
23S rRNA pseudouridine1911/1915/1917 synthase [EC:
5.4.99.23
]
Organism
gab
Gossypium arboreum (tree cotton)
Brite
KEGG Orthology (KO) [BR:
gab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
gab03009
]
108465476
Enzymes [BR:
gab01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.23 23S rRNA pseudouridine1911/1915/1917 synthase
108465476
Ribosome biogenesis [BR:
gab03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
108465476
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Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
S4_2
Motif
Other DBs
NCBI-GeneID:
108465476
NCBI-ProteinID:
XP_017621288
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Position
5:complement(15938265..15940773)
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AA seq
432 aa
AA seq
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MVPLYTCCPFPSSKALQISPSFLLLSSRNPKFLPFTISRILRATSISTSAAKHEEPTRTS
YAGVQLEETVDETKQGKLRLDSWISSRIQGISRARVQSSIKSGLVKVNGRVVDKVSHSLR
AGDKVNCVISDLQPLKAEPEDIPLDIVFEDDHVLVVNKPSHMVVHPAPGNANGTLVNGIL
HHCSLPTVASSEKEVLFDTEDMSDDEQDIFHGASAGAASVRPGIVHRLDKGTSGLLVVAK
DEHSHAHLSEQFKQHTIQRVYISLTCGVPSASAGRVDIPIGRDSNNRIRMAAVPGLSHHG
RARHAASRYKVIEVLAGGGSALVQWRLETGRTHQIRAHAKYMGIPLLGDEVYGGTKNMAL
SLLRPRTPPYYNDELSRLVSRLERPYLHALVLGFEHPHSGEKMRFSCPPPPDFGEILNHL
RKIGIEKPISKE
NT seq
1299 nt
NT seq
+upstream
nt +downstream
nt
atggtaccgctctacacttgttgcccgtttccttcatctaaagcccttcaaatctcccct
tctttcctcctgctctcctctcgaaaccctaaatttcttcccttcacgatctcaagaatc
cttagggccacctccatttccacttctgccgccaaacatgaagaaccgactagaaccagc
tatgccggcgttcaacttgaagaaaccgtggatgagaccaagcaaggcaagcttcggctc
gattcctggatctcctctcgaattcaaggcatcagcagagctcgtgtgcagtccagtata
aaatcaggccttgtaaaggtcaatggccgcgtcgtcgacaaggtctcgcatagcctgaga
gctggagataaggttaactgtgtaatttccgatctgcaaccattgaaagccgaacctgaa
gatattccattggatatagttttcgaggacgaccatgttcttgtcgttaataaaccttcc
cacatggttgttcatccagcacctggaaatgctaatgggacattagtaaatggaattctc
caccattgtagtttacccacagtggcatcgtctgaaaaggaagtcctttttgacacagag
gatatgtctgatgatgaacaagatattttccatggcgccagtgcaggagcagcttctgtt
cggccagggattgtacatagattggataaaggcaccagtggattgcttgttgttgcaaag
gatgaacattcccatgcccatttgtcggaacagtttaagcaacacactatccagagggtc
tacattagtcttacttgtggagtgccttcagcttctgctgggcgtgtggacattcccatt
ggccgtgattcaaataaccgcattcggatggctgctgtaccagggttaagtcatcatggt
cgggctcgtcatgctgctagtagatataaagtaattgaagtgctcgctggtggtggttcc
gcactggttcaatggagactggaaaccgggcgtactcatcagattcgtgcacatgcaaag
tacatgggaattcctttgttgggtgatgaggtgtatggcgggacaaagaacatggccttg
tcactgcttcgtcctaggacccccccttactataatgatgaactttcacggctggtttct
agattggagaggccataccttcatgctttagtccttggttttgaacatccccactcaggc
gagaagatgcggttttcatgcccaccccctccagattttggtgaaatattgaatcatctt
cgtaaaattggcatagagaagcctatttctaaggaataa
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