KEGG   Gossypium arboreum (tree cotton): 108465664
Entry
108465664         CDS       T05776                                 
Name
(RefSeq) protein decapping 5-like isoform X1
  KO
K18749  protein LSM14
Organism
gab  Gossypium arboreum (tree cotton)
Brite
KEGG Orthology (KO) [BR:gab00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:gab03019]
    108465664
Messenger RNA biogenesis [BR:gab03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     108465664
SSDB
Motif
Pfam: LSM14 FDF SM-ATX DUF1539
Other DBs
NCBI-GeneID: 108465664
NCBI-ProteinID: XP_017621526
LinkDB
Position
3:complement(58196178..58200780)
AA seq 625 aa
MNFICDAISNKQRRRPPSSQSETLISIFSVHFLSLLNSHVIARKKKRDRLMETGSSSTKS
GSTADSYIGSVISLTSKSEIRYEGVLYNINPDESSIGLKNVRSFGTEGRKKDGPQVPPSD
KVYEYILFRGSDIKDLQVKSSPPAQPTPPINDDPAIIQSQFPHPVSTTTSALSAATRPLT
DPTTHAAQMGLPGSNYQAALPLYLPGGNLRSWGASPPPPAANGNGLPMPMYWEGYYGPPN
RPPHLHHQSLLRHSPGQSMPPFMQQPMQYPNFNASFPIGLGNLQSSSLPEAPPPLFPSST
GSPNVTSTSSDLPPAPSASLASEALLNKAPSPAISPAALGASLPAISPLTTGPELNPIVP
PIAHKPSTNPTFLHQTTSQAASSIIGVSNSVSMETPTPSMVTPGQLLESGTTVVPSPQPD
ATVHKDVEVVQVFSSPTEPSAPVVSEAQPPILPLPRAAHKPNGPSFQPRHGYRGRGRGRG
TWNSRPVTKFTEDFDFIAMNEKFKKDEVWGHLGKSRKSNSKDKEGDASDEVGYQDEDDAE
TSKVQAKPVYNKDDFFDTLSCNALDNNTQNGRPRFSEQMKLDTETSGFFSGHRGGRGGRF
GGGYHGRGYGHVGRGSGRAMSMRTP
NT seq 1878 nt   +upstreamnt  +downstreamnt
atgaattttatctgcgatgctatctcaaataaacaaaggcgtcgtccacccagttcacaa
tctgaaaccctaatctctatcttttcagttcactttctctctctattaaattctcatgtt
atagcaaggaagaagaaaagagatcggttaatggagacgggcagttcgagtacgaagtcg
ggttcaacagccgattcctacattggaagcgtaataagcttaacttccaagagtgagatc
agatacgagggcgttctttacaacatcaaccctgacgagtccagtattggattaaaaaac
gtacgatcatttggaactgaaggaaggaaaaaagatggtccgcaagtacccccaagtgac
aaagtttatgagtacatattattccgcggaagtgacattaaggatttacaagttaaatct
tcaccacctgcacagcctaccccacccataaatgatgatcctgcaattatccagtctcag
tttccgcacccagtttccacaactacaagcgcgctttctgctgctacccgacctttaacc
gatcctactacacatgctgctcaaatgggactaccggggtctaattatcaagcagcccta
cctttatatctacctggagggaacttacgttcatggggggcatcgcctccacctccagct
gctaatggtaatgggcttcctatgccaatgtattgggaaggatactatggtcccccaaac
cggcctccacatttgcaccatcaatctttgcttaggcactctccaggacaatcaatgcca
cctttcatgcagcaaccgatgcaatatccaaattttaatgcctcttttcctattggactt
ggcaacttacagagttcaagtttgcctgaagctcctcctcctttatttccttccagtaca
ggttcccctaatgtaacttctacgtcgtctgatttgcctcctgcaccctctgcttcacta
gcttcagaagccttgcttaataaagctccaagtcctgcaatttctccagctgctcttggt
gctagcttaccagcaatttctcctttgactactggtccagaattaaatcctattgtacca
ccaattgcccacaagccaagtactaatcctacctttttgcatcaaactacttctcaggct
gcatcctctataattggggtttcgaattccgtttccatggaaacacctacaccatcaatg
gtgacccctggtcagctcttagagtcgggaacaactgttgttccttcaccacagcctgat
gcaactgttcataaagatgtagaagtggttcaagtgttctcgtcaccaactgaaccatca
gcacctgttgtctcagaagctcagcctccaatattgccattacctcgtgctgcccataag
ccaaatggaccttccttccaacctcgtcatggttatagaggacgtggacgaggaagagga
acttggaattcacgtccagttacaaaatttactgaggacttcgatttcattgcaatgaat
gagaaattcaagaaagatgaagtatggggtcatcttggtaagagtaggaaatcaaattct
aaggataaagaaggggatgccagtgatgaagttggttatcaagatgaagatgatgccgaa
acatctaaggttcaagccaagcctgtttacaataaggatgacttttttgatactctctcc
tgcaatgcccttgataacaacacacaaaatggaaggccaagattctctgagcagatgaaa
ttggacacagagacttctggttttttttcaggacatcgaggtggacgtggtggtcgcttt
gggggtggttatcatggaagagggtatgggcatgtggggaggggtagtgggcgagctatg
tctatgcgaactccatag

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