Gossypium arboreum (tree cotton): 108465748
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Entry
108465748 CDS
T05776
Name
(RefSeq) PHD finger protein MALE MEIOCYTE DEATH 1
KO
K26271
PHD finger protein MS1/MMD1
Organism
gab
Gossypium arboreum (tree cotton)
Brite
KEGG Orthology (KO) [BR:
gab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
gab03000
]
108465748
Transcription factors [BR:
gab03000
]
Eukaryotic type
Zinc finger
Other zinc fingers
108465748
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GFIT
Motif
Pfam:
PHD
PHD_5
Motif
Other DBs
NCBI-GeneID:
108465748
NCBI-ProteinID:
XP_017621622
UniProt:
A0ABR0QUQ1
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Position
2:59794021..59797106
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AA seq
700 aa
AA seq
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MSIPILETCRKRKRRPKLFGLHSFAEPGCPINPTGPFRDNIRIFLKQCAEPEDYCAKGMP
LWCTLLVRDKSCVVPLYTIEEGVNHSLNPFCDHCRCTGWGNHLVSKRKYHVVIPNDRDWN
KPLEDNVLNIHSHLLHGLIHCNGFGHLLCINGIEGGSKYLYGREIMDLWDRICEILKARK
ISVEDASKKHGMDLRLLHGVAYGHTWFGRWGYKFCRGSYGVSEENYDRAIEILSSQKLDK
IIQDFSDREQSRQIKCMVQHYRDLSESQLVTIRDLFKFMLTIKSRSALQKKLVAATAAPS
ASVQKNSIRISFHKKDNSKEKYLRCKRFTSVIAHMDSRWPAKRLEFAAEVIVDALKQHKS
EVSHGGMTRQDLRDAARMHIGDTGLLDYVLKSMNNVIVGCHIVRRGINSARVLEYTIDDV
DNPVKDLKLLEATEEIHQKPLPELLPAPAPVPGTDVYNDVVYLYNNTLLNYPESELLELA
TQAVLDSKHFVKDRPFRDEDDQLLRFFCQVMPGLFDAENMATETSPAGELVMVPLHATVF
DLKQAAEKALRDTYCIMDKFVVTEVDNLGEMEDRDVLFGALESGAEILVRGSGIDLDSNL
KHEGGADNWIVRCECGARDDDGERMIACDICEVWQHTRCCGIEDSEAVPPLFVCPGCCTS
FGPPMTNSPLEFQCSDDLLLDSATMYGMDYEYDNCIGLLQ
NT seq
2103 nt
NT seq
+upstream
nt +downstream
nt
atgtcgatcccaatcctagagacgtgcaggaaaagaaagagaaggccaaagttatttggg
ttacattcatttgcagaacctggttgcccaataaaccccaccggtcccttccgagataac
atccgtattttccttaaacaatgtgctgagcccgaagattactgtgccaaaggtatgccc
ctttggtgcacccttcttgttcgtgacaagagctgcgtcgtccctctttacaccattgaa
gagggtgttaaccactctttaaaccctttctgtgatcactgcaggtgtacaggttggggc
aaccatttagtttccaagaggaagtatcatgtggtaataccaaatgatcgagactggaat
aagcctttagaggataatgtattaaacatccattcccatctcttacatgggttgattcac
tgtaatggatttggtcatctactctgcatcaacggaattgaaggtggttctaagtatctc
tatggcagagaaatcatggatctctgggatcgtatttgtgaaattcttaaggctcggaaa
atctcagtggaggatgcatcgaagaagcacggtatggatctacgtttgcttcatggagtc
gcgtatggacatacatggtttggacgttggggttacaagttctgccgtggaagctatggt
gtttcagaggaaaattatgatagagcaattgaaatactcagctcccagaaacttgacaaa
atcattcaagatttcagtgacagggagcaaagcagacaaatcaagtgcatggttcagcat
tatagagatcttagtgagagccagttggtcacaatccgagatcttttcaagtttatgctc
actatcaaatctcgtagtgcattgcagaagaaattagtagcagctactgctgctccttca
gcttctgtacagaaaaattccatcagaatatcattccataagaaggacaattcgaaggaa
aaatatttgagatgcaagaggtttactagtgtcatagctcatatggatagcagatggccc
gcaaaaaggctagaatttgcagcagaggtgattgtagatgctttgaagcaacataaatct
gaggtcagtcatggtgggatgacaaggcaggatctaagagatgcagctcggatgcatatt
ggtgatacgggtttgctggattacgtattgaaatcaatgaacaatgtaatcgttggatgt
cacattgtgcgtcgtggaattaactcagctcgggttttagaatacacaattgacgacgta
gacaatccagttaaggaccttaagttgttagaagcaacagaggaaatacatcaaaaacct
ctaccagaacttttgcctgctcctgctcctgtccctggaactgatgtttataatgatgtg
gtgtatttgtataataacacactattgaactatccagaatcagaattgctggaacttgcc
acccaggcagttctagatagcaaacacttcgtgaaggatcggccatttagagatgaagat
gaccagttgttgagattcttttgccaagtcatgcctggtttgtttgatgcagagaatatg
gcaactgagacatcacctgctggtgaacttgtcatggttccattacatgccacagttttt
gacctaaaacaagctgctgaaaaagcattgagggatacttattgtattatggataagttt
gtggtgacagaggtcgacaacctaggtgaaatggaagatagggatgtactgtttggagca
cttgagtcaggtgcagaaattctggtcagagggagtggaatagatttggacagtaatctg
aagcatgaaggcggtgcggacaattggattgtcagatgtgaatgtggggctcgagatgat
gacggggagaggatgatagcatgtgacatttgtgaggtgtggcagcacacacgctgctgt
ggcatagaggactctgaggctgtgccaccattgtttgtgtgcccagggtgctgcacttct
tttggaccacctatgaccaactctcccctagaatttcagtgttctgatgatctgctattg
gactcggccactatgtatgggatggactacgagtatgacaactgcattgggctactacaa
tga
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