Gossypium arboreum (tree cotton): 108465929
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Entry
108465929 CDS
T05776
Name
(RefSeq) uncharacterized protein LOC108465929
KO
K11338
RuvB-like protein 2 [EC:
5.6.2.3
]
Organism
gab
Gossypium arboreum (tree cotton)
Pathway
gab03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
gab00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
108465929
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
gab03036
]
108465929
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
gab03037
]
108465929
Enzymes [BR:
gab01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
108465929
Chromosome and associated proteins [BR:
gab03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TIP60 complex
108465929
Chromatin remodeling factors
SRCAP complex
108465929
INO80 complex
108465929
INO80 complex (yeast)
108465929
SWR1 complex
108465929
ASTRA complex
108465929
Cilium and associated proteins [BR:
gab03037
]
Motile cilia and associated proteins
Dynein assembly factors
108465929
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TIP49
TIP49_C
AAA
DnaB_C
RuvB_N
AAA_22
AAA_19
AAA_5
AAA_16
Mg_chelatase
AAA_25
ATPase
Zeta_toxin
TsaE
AAA_17
bpMoxR
nSTAND3
AAA_18
AAA_7
TiaS_TCKD
SLFN-g3_helicase
Parvo_NS1
Motif
Other DBs
NCBI-GeneID:
108465929
NCBI-ProteinID:
XP_017621796
LinkDB
All DBs
Position
1:17348755..17351206
Genome browser
AA seq
465 aa
AA seq
DB search
MTELKLSESRDLTRIERIGAHSHIRGLGLDSSLEPRDVSEGMVGQAQARKAAGVILQMIK
DGKIAGRAILLAGQPGTGKTAIAMGMAKSLGLETPFSMLSGSEIFSLEMSKTEALMQAFR
KSIGVRIKEETEIIEGEVVEIQIDRPAVSGAASKTGKLTLKTTDMETVYDLGAKMIEALA
KEKVQSGDVIAIDKASGKITKLGRSFSRSRDYDAMGPQTKFVQCPDGELQKRKEVVHSVT
LHEIDVINSRTQGFLALFTGDTGEIRAEVREQIDTKVAEWREEGKAEIVPGVLFIDEVHM
LDIECFSFLNRALENEMAPILVVATNRGITSIRGTNYKSPHGIPIDLLDRLLIITTQPYS
EDEIRKILDIRCQEEDVEMSEDAKQLLTKIGHETSLRYAIHLITASALNCQKRKGMVVEV
QDITRVYSLFLDVRRSTQYLMEYQKEYMFNEASIVDGGDGDAMHD
NT seq
1398 nt
NT seq
+upstream
nt +downstream
nt
atgacggagctgaaactctccgagagccgagacctgacccgaatcgaacgcattggggct
cattcccacatacggggcctaggcctcgactcctctctggagccccgtgacgtctcggaa
ggaatggtgggccaagcacaagctcgtaaagccgccggtgtcatcctccaaatgatcaaa
gacggtaaaattgctggccgtgctatcttattagcgggacaacctggaactggaaaaact
gccattgccatgggcatggccaaatctcttggccttgaaacccctttctctatgctctct
ggcagcgaaatcttctcccttgagatgtcgaaaaccgaagctttaatgcaagcgtttcga
aagtccatcggagtaagaatcaaggaagaaactgaaataatcgaaggcgaagtcgttgaa
atccagattgatcggccggcagtttcaggggcggcttcaaaaactgggaaattaacgctt
aaaacgacggatatggagaccgtttacgatttgggggcgaagatgatcgaggcattagcg
aaagagaaagtgcagagtggagatgtgatagctattgataaagcttcaggaaaaataacg
aagcttggaaggtcattttcaaggtcgagggattacgatgctatgggtccgcaaacaaag
ttcgtgcaatgtccagacggagagttgcagaaaagaaaagaagttgtccattctgttacg
cttcatgagatcgatgttattaacagcagaacacagggatttctagctcttttcactggg
gatactggtgaaatccgtgctgaggtgagagaacaaattgacacgaaggtggcagagtgg
agggaggaagggaaggctgaaatcgtgcctggtgttctctttatcgatgaggtgcacatg
cttgatatcgagtgcttttctttcctgaaccgtgctcttgagaatgagatggccccgata
ttagtcgttgctacaaatagaggaataacttcaatccgtggcacaaattacaaatcccct
catggaattccaattgatcttcttgatagactactaatcatcactactcagccttattct
gaggatgaaattcgtaagattctagacatcaggtgccaagaggaagatgtagagatgtct
gaagatgcaaaacaactgttgaccaaaattgggcacgagacctccttgagatatgctatc
catctgatcacagcttctgcattgaattgccagaagcgaaaggggatggttgtggaagtg
caggacatcactcgtgtttacagtctatttctagatgtaaggagatcaacgcagtacttg
atggagtaccaaaaagaatacatgttcaatgaagcatcaattgttgatggtggggatggc
gatgccatgcatgattga
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