Gossypium arboreum (tree cotton): 108465983
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Entry
108465983 CDS
T05776
Name
(RefSeq) autophagy-related protein 18a-like
KO
K22991
WD repeat-containing protein 45
Organism
gab
Gossypium arboreum (tree cotton)
Brite
KEGG Orthology (KO) [BR:
gab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gab04131
]
108465983
Membrane trafficking [BR:
gab04131
]
Autophagy
Other autophagy associated proteins
Others
108465983
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PROPPIN
WD40
Beta-prop_EML_2
WD40_WDHD1_1st
WD40_Prp19
WD40_CDC20-Fz
BCAS3_WD40
ANAPC4_WD40
Beta-prop_Vps41
Beta-prop_EML
Beta-prop_WDR90_POC16_2nd
WDR55
Beta-prop_HPS5
Beta-prop_WDR19_1st
WD40_MABP1-WDR62_2nd
KNTC1_N
Beta-prop_IFT122_1st
Beta-prop_IFT140_2nd
EIF3I
Ge1_WD40
PEP5_VPS11_N
DUF7099
Beta-prop_TEP1_2nd
Beta-prop_RIG_2nd
Motif
Other DBs
NCBI-GeneID:
108465983
NCBI-ProteinID:
XP_052879553
LinkDB
All DBs
Position
12:1252034..1255173
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AA seq
355 aa
AA seq
DB search
MQHHPSSEPDSDANPNFHSPLLNPPDSVPPAVAPSSLLHLSFNQDHGCFAAGTDHGFRIY
NCDPFREIFRRDFDRGGGIGVVEMLFRCNILALVGGGPDPQYPPNKVMIWDDHQSRCISE
LSFRSEVRSVRLRRDRIIVVLEQKIFVYNFVDLKLLHQIETIANPKGLCAVSQGAGSLVL
VCPGLQKGQVRVEHYASKRTKFIMAHDSRIACFALSQDGQLLATASTKGTLVRIYNTIDG
SLLQEVRRGADRAEIYSLAFSSNAQWLAVSSDKGTVHVFSLKINAGSPSTTQSRSTSEPV
VSPHSSLSFIKGVLPKYFSSEWSVAQFRLVEGSQYLVAFGHQKNTVVILGIDGSF
NT seq
1068 nt
NT seq
+upstream
nt +downstream
nt
atgcaacatcacccttcttccgaaccggactccgatgctaaccctaattttcactcccca
cttttgaacccccccgattcggttcctccagccgtggctccgtcgtctcttctccacctc
tccttcaaccaggatcatggctgctttgccgctggcactgaccatggcttccgaatctac
aattgcgatccatttcgcgagatctttcgccgagacttcgatcgcggtggcggtatcggg
gttgttgagatgctttttcggtgtaatattttggctcttgttggtggtggacccgatccg
cagtacccgcctaataaggttatgatctgggacgatcaccaaagccggtgcatcagcgag
ctttcgtttcgttcggaagtgagatcggttcggcttcggagggaccgaatcatagtcgtt
ttggaacagaaaattttcgtttacaattttgtggatttaaagctcctacaccagattgag
accatcgcgaatccaaaaggactctgcgcggtgtctcagggagcaggatcattggttttg
gtttgccctggattgcaaaaggggcaggttagggtggagcattacgcctcgaagaggact
aagttcatcatggctcatgattcgagaattgcgtgctttgcgctgtcgcaggatggccag
ttgcttgctaccgctagcactaaagggacgctggttcgcatttataataccattgatgga
agcttgctgcaagaggtaaggaggggtgcagatagagctgaaatttacagtttggcattc
tcttcaaatgcccaatggttagcagtttcaagtgacaaaggcactgtccatgttttcagc
cttaaaattaatgccggatctcctagcactacccaatcacgaagtacatcggagcctgtt
gtatctccccattcatctctttcttttatcaaaggtgtgttaccaaagtacttcagttca
gaatggtcagtggctcagttccgcctggttgaaggttctcagtaccttgttgctttcggt
caccaaaagaatacagtggtaattcttggcattgatggaagcttctaa
DBGET
integrated database retrieval system
