Gossypium arboreum (tree cotton): 108466016
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Entry
108466016 CDS
T05776
Name
(RefSeq) autophagy protein 5 isoform X3
KO
K08339
autophagy-related protein 5
Organism
gab
Gossypium arboreum (tree cotton)
Pathway
gab04136
Autophagy - other
Brite
KEGG Orthology (KO) [BR:
gab00001
]
09140 Cellular Processes
09141 Transport and catabolism
04136 Autophagy - other
108466016
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gab04131
]
108466016
03029 Mitochondrial biogenesis [BR:
gab03029
]
108466016
Membrane trafficking [BR:
gab04131
]
Autophagy
Autophagosome formation proteins
Atg12 conjugation proteins
108466016
Mitochondrial biogenesis [BR:
gab03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
108466016
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATG5_UblA
ATG5_HBR
ATG5_UblB
Motif
Other DBs
NCBI-GeneID:
108466016
NCBI-ProteinID:
XP_017621881
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All DBs
Position
11:23869368..23875209
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AA seq
356 aa
AA seq
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MEAPKYVWEGAIPLQIHLHESQVTTLPPPPPALILAPRIGYLPLLAPLIKPYFSSTLPPG
VDTIWFDCNGLPLKWYIPTGVLFDLLCPEPERPWNITVHFRGYPGNVLIPCEGEDSVKWS
FINSLKEAAYIMNGNCKNVMNMSQSDQLELWHSVMNGNLEAYQRVSSKLKLATVDDEYAS
LCLQKSQQSVIETDLPAQAKTGRVPVRLYVLSVSKDFDDLDEIPRVDSWEKISYINRPVE
IRKEDKCFTLHDALKILLPELFLDESLMNVKLGGVDLEDAVRNSNEDVTSVKVVEDQGQN
VCKQPEACRISSSAKIKLIRIQGIEPKLEIPFSWVANNLLNPDYFLHVCVCVKVAQ
NT seq
1071 nt
NT seq
+upstream
nt +downstream
nt
atggaagcaccaaagtatgtatgggaaggcgcaattcctcttcaaatccatctccacgaa
tcccaagtcaccactcttcctcctcctcctcctgctctgatcttagctccacggatcggg
tatctgccgctgttagcgcctttgattaagccctattttagcagcacacttcctccaggt
gttgataccatttggttcgattgcaatggcctccctctcaaatggtacataccaactgga
gttctttttgatcttctgtgccctgagcctgaaaggccttggaacattactgtccatttt
agaggatatcccggaaatgtattgataccttgtgaaggtgaagattctgtgaagtggagc
tttataaactcattgaaagaggcagcgtatataatgaatggaaattgcaagaatgttatg
aacatgtctcagtctgatcagctggagctttggcattctgtcatgaatggtaatttggaa
gcctaccaacgggtctcatctaagcttaaacttgcaacggttgatgatgagtatgcaagt
ttgtgcctgcaaaaatctcaacaatccgtcatagaaacagatttgcctgcacaagcgaaa
acaggaagagttccagttagattatatgttctaagtgtaagcaaggattttgatgatttg
gacgagattcctcgagtcgatagttgggagaaaatctcttacataaaccgacctgttgag
atccgcaaagaagataaatgcttcactttacacgatgctttgaaaatccttctgccggaa
ttgtttttagatgaatccttaatgaatgtaaaattaggcggagtagatcttgaggatgca
gttagaaattcgaatgaagatgtgaccagtgttaaggtagtggaagaccagggacaaaat
gtatgtaaacaaccagaggcttgccgcatttccagtagtgccaaaatcaagcttatccga
attcagggtatcgaaccaaagttagagatacccttctcttgggtagcaaacaatttatta
aacccggactattttcttcacgtctgtgtttgtgtcaaagttgcacaataa
DBGET
integrated database retrieval system
