KEGG   Gossypium arboreum (tree cotton): 108466323
Entry
108466323         CDS       T05776                                 
Name
(RefSeq) uncharacterized protein LOC108466323
  KO
K20241  WD repeat-containing protein 44
Organism
gab  Gossypium arboreum (tree cotton)
Brite
KEGG Orthology (KO) [BR:gab00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:gab04131]
    108466323
Membrane trafficking [BR:gab04131]
 Protein recycling
  Rab GTPases and associated proteins
   Rab11 associated proteins
    108466323
SSDB
Motif
Pfam: WD40 Beta-prop_EML_2 WD40_Prp19 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_CAF1B_HIR1 EIF3I Beta-prop_TEP1_2nd Beta-prop_WDR90_POC16_2nd WD40_MABP1-WDR62_2nd Beta-prop_RIG_2nd WDR55 Beta-prop_IFT122_1st NBCH_WD40 Beta-prop_TEP1_C Beta-prop_WDR75_1st Beta-prop_EML Beta-prop_HPS5 WD40_MABP1-WDR62_1st ANAPC4_WD40 WD40_like Beta-prop_EIPR1 Beta-prop_WDR35_TULP_N WD40_RFWD3 Beta-prop_IFT140_1st WDR90_beta-prop_4th Beta-prop_DCAF4 WDR54
Other DBs
NCBI-GeneID: 108466323
NCBI-ProteinID: XP_052877808
LinkDB
Position
2:114316019..114321622
AA seq 937 aa
MEPRKLERRKTMTMNWDGLGDDDDEFFEPSNRVSSAVPRDLTDEDSDDFDDCRLSFSSNG
SPIHRATEVATVAPPRVAPSIMPPMSPNYDIWKSSPGSIKHRRQQLFQGMGLSANKELLS
FKHLDTNEVLNGSVGTTLPPPPPPPKVTTTVTTDSKDEKNKKDGSKESKPRSASVGGSRS
DGEMELLSIEKKRKQQLLGSVSKQSLRRTSSLMSTPRAQSHPNKEATAKKASPKDATSVA
SSGSNNNNNNNASTKQNDGLTSAFSDNNFEAFFLIKNLDNGKEFIVNEFDQDGMWNKLSD
IQTGKQLTMDEFEKSVGYSPVVKDLMSRDENVNRMVTNQHGSDRKLNSYFSKSLKVSKKR
GAAVLKSIKGVATSMTLRGEKEKEQNLFNIDQKKNNGNSNNNQWVKVRQTGKSYKELSAL
HLCQEIQAHEGSIWCIKFSTNARFLASAGEDTMIYVWEVQECEVTPINEACSSPEDKKKK
GKGSSSSKKGNQLPNYVHVPETVFSLSDKPICSFKGHLDDVLDLSWSRSQQLLSSSMDKT
VRLWDLDTKSCLKLFAHNDYVTCIHFNPMDDDHFISGSLDTKVRIWNIPKRQVVDWTDIN
EMVTAVCYTPDGQGAIIGTHKGNCRLYSTEDCRLTQLDQITSQNKKKDNTKKITGFQYCP
INPTELLITSADSRIRVLDGPEVFYKFKGFKNTNSQIAATFTSDGTYVVSASEDSQVFIW
RTEEPRNTGTGKRSVITARGHEYFPCKDVSVAIPWPGTIKSEPLSMTGSSHLKRNSKSLQ
VPNGESPTKNDHNKKILPLPPLPKKKSNHHLGKIITDEEGEMADSMSRSSTASASSRSSS
VSNDDSSSSTSSMSRSSTLSGASNLNSSGSNQGSGSIRYGDSPSISSFIGSSPWSWFNVS
GHGHNAAAWGLVIVTATLSGEIRIYQNFGLPRRVSRL
NT seq 2814 nt   +upstreamnt  +downstreamnt
atggagcctcgcaaattagagcgaagaaaaaccatgaccatgaattgggatggcctaggt
gacgatgatgatgagttctttgaacctagtaatagagtatcctccgccgtgcctcgagac
ttgaccgatgaagatagcgatgatttcgatgattgtcgactttcgttctcgtccaatggc
tcacccattcatcgtgcaacggaggtggcgacagtcgcaccgccaagagtggcaccatca
ataatgccaccaatgtcgcctaattacgatatatggaagtcatcgcccgggtccataaag
caccgtagacaacaattatttcaagggatgggcttatccgctaacaaagagcttttaagc
ttcaaacatttagataccaatgaggtacttaatggttcggttgggacgacactaccacca
ccaccaccaccacccaaagttacaactacagttacaactgattctaaagatgagaaaaac
aagaaagatggttcgaaagaaagcaagccacgttctgcgtcggtgggcggatctcgatcc
gacggcgaaatggagctgctttcgatcgaaaagaaacgaaaacaacagttgctcggttcg
gtatcgaaacaaagcttgaggagaacttcgtcattaatgtcaacacccagagcacaatcg
catcctaacaaagaagcaaccgctaagaaagcttcacctaaagatgctacctccgtggcg
agtagtggtagcaacaacaacaacaataacaatgcttcgacgaagcaaaacgacggttta
acgtctgctttttcggacaacaactttgaagcatttttcttaatcaagaatttggataac
gggaaagaatttatcgtcaacgagttcgatcaagacggaatgtggaacaagttgagcgat
atccaaacgggtaaacaattaacaatggatgaattcgagaaatcggtagggtattcgccg
gtggttaaagatttaatgagccgtgatgaaaatgttaaccgcatggtaacgaaccaacac
ggcagcgaccggaaactcaactcttatttttcaaagagcttgaaagtaagcaaaaagcgc
ggcgccgccgtgttgaaaagcatcaaaggggtggcaacttcgatgacgttgagaggtgaa
aaagaaaaggaacaaaatttatttaatatcgatcaaaagaagaacaacggaaatagtaat
aataatcaatgggtgaaagttcgacaaacggggaaatcgtataaggaattgagtgcttta
catttatgccaagagattcaagctcatgaagggtcgatttggtgtataaaattcagtacc
aacgccaggtttttggctagcgccggtgaagatacgatgatatatgtatgggaagtacaa
gaatgtgaagtgacgccgataaatgaagcgtgttcatccccggaagataaaaagaagaaa
ggaaaaggatcgtcgagtagtaaaaaagggaatcaacttcctaactatgttcatgtgccg
gaaactgtgttttcattgtcggataagccgatctgttctttcaaaggacatttggatgat
gttttggacttgtcttggtctcgatcccagcaattgctttcgtcttctatggacaaaacc
gtaaggttatgggatttggataccaagagctgcctaaaattatttgcccacaatgattat
gtaacatgcatacatttcaatccaatggatgacgatcatttcataagtgggtcacttgat
acaaaagttaggatttggaacataccaaagaggcaagttgttgattggactgacattaat
gaaatggttactgctgtctgttacactcctgatggtcagggtgccataattggtacacat
aaaggcaattgtcgactatacagtactgaggattgcagattaactcaattagatcagatc
accagtcaaaacaagaagaaagacaatactaaaaagatcactggttttcaatattgtccg
attaatccaaccgaattacttatcacttctgccgattcccgaatacgagttttggatggt
cccgaagtcttttataaatttaaagggttcaaaaatacaaacagtcaaattgcagctacg
tttacatccgacggaacatatgtggtcagtgcaagtgaagattctcaggttttcatatgg
agaaccgaagagcctcggaacaccggcaccggaaaacgatcggtgatcaccgcacgaggc
cacgaatatttcccatgcaaagacgtttcggtagcaatcccatggccaggcactatcaaa
agcgagcccctgtcaatgacaggatcatcgcatttgaaacggaactccaaaagtttacaa
gttcccaacggcgaatccccgactaaaaatgatcacaacaagaaaattttgcccttaccg
ccacttccgaaaaagaagagcaaccaccatctaggcaaaattataactgacgaagaaggt
gagatggccgattcgatgtcgaggtcttccactgcttcggcttcaagtcgaagtagttcg
gtctcaaatgatgattcatcatcatcaacatcatcgatgtcaaggtcttccactctttcc
ggtgccagtaacttgaactcttcaggttcgaaccagggttcgggttcaataagatacggt
gattcaccatcgatatcttctttcataggatcgtcgccttggtcgtggttcaatgtcagc
ggtcacggacacaatgcggcagcttggggactagtaattgtgacggccactttgagtggc
gaaataaggatttaccaaaatttcgggttaccacgtagagttagtcgcctctaa

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