Gossypium arboreum (tree cotton): 108466437
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Entry
108466437 CDS
T05776
Name
(RefSeq) E3 ubiquitin-protein ligase CHIP-like isoform X1
KO
K09561
STIP1 homology and U-box containing protein 1 [EC:
2.3.2.27
]
Organism
gab
Gossypium arboreum (tree cotton)
Pathway
gab04120
Ubiquitin mediated proteolysis
gab04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
gab00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
108466437
04120 Ubiquitin mediated proteolysis
108466437
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
gab03110
]
108466437
04131 Membrane trafficking [BR:
gab04131
]
108466437
04121 Ubiquitin system [BR:
gab04121
]
108466437
Enzymes [BR:
gab01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
108466437
Chaperones and folding catalysts [BR:
gab03110
]
Other chaperones and cochaperones
Others
108466437
Membrane trafficking [BR:
gab04131
]
Autophagy
Aggrephagy
Other aggrephagy associated proteins
108466437
Ubiquitin system [BR:
gab04121
]
Ubiquitin ligases (E3)
U-box type E3
108466437
Multi subunit type E3
STUB1-CHIC2 complex
108466437
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
U-box
TPR_1
TPR_2
TPR_11
TPR_8
TPR_16
TPR_17
ANAPC3
TPR_14
TPR_12
zf-NOSIP
TPR_BSK1_C
TPR_9
zf-Nse
Motif
Other DBs
NCBI-GeneID:
108466437
NCBI-ProteinID:
XP_017622285
LinkDB
All DBs
Position
7:complement(43024450..43028563)
Genome browser
AA seq
283 aa
AA seq
DB search
MVSGSALSAAAKQAEQLRKDGNIYFKKDRFGAAIDAYTEAITLCPNVPVYWTNRALCHRR
RNDWLKVEEDCRRAIQLDYSSVKAHYMLGLALLQKQKLDEGVKELQKALDLGRGANPKGY
MVDEIWQELAKAKYMLWEHASSKRSWELQSLKEACEAALREKHFLDDSQPEGFLVEAGIS
HMKQLEVLRQVFRKAGEADIPGEFQVPDYLCCKITLDIFRDPVITPSGVTYERAVILDHL
QKVGKFDPITREPLDHSQLVPNLAMKEAVQAYLDKHGWAYKLD
NT seq
852 nt
NT seq
+upstream
nt +downstream
nt
atggtgtcaggttcggcattaagcgcggcagccaaacaagcggagcaattgaggaaagat
ggcaacatttatttcaagaaagatcgttttggggcagccatcgatgcttatactgaggcg
attacgttatgccccaatgttcctgtatattggacgaatcgcgctctttgccatcgcaga
cggaatgattggttgaaagtggaagaggattgccggcgagctattcagctcgactacagt
tctgtcaaggcacactacatgttgggacttgccttacttcagaagcaaaaattagatgaa
ggggtcaaggaactacaaaaggctttggatcttggaaggggtgcaaatccaaagggttat
atggtagatgagatttggcaggagcttgcaaaagcgaagtacatgctatgggagcatgca
tcttccaagcgttcgtgggaattgcaaagtttgaaggaggcttgtgaagctgctcttaga
gaaaaacattttcttgatgattctcaaccagaaggtttcttagttgaggctggtatttct
catatgaaacaactggaggttctgaggcaagtgtttaggaaagctggtgaagctgacatc
cctggtgagtttcaggtgccggattacttgtgttgtaaaatcacacttgatatcttccgt
gatcctgtcattactccaagtggagttacgtatgagagagcagtgatccttgaccatctt
cagaaggttggtaaatttgatccaatcacacgcgaaccgcttgatcattcccaacttgta
ccgaacttggcaatgaaggaagcagtccaagcatacttagataaacatggttgggcttac
aaattggactaa
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