Gossypium arboreum (tree cotton): 108466792
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Entry
108466792 CDS
T05776
Name
(RefSeq) probable rhamnogalacturonate lyase B
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
gab
Gossypium arboreum (tree cotton)
Brite
KEGG Orthology (KO) [BR:
gab00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
108466792
Enzymes [BR:
gab01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
108466792
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GFIT
Motif
Pfam:
Rhamnogal_lyase
CBM-like
fn3_3
CarboxypepD_reg
CarbopepD_reg_2
Imm41
Motif
Other DBs
NCBI-GeneID:
108466792
NCBI-ProteinID:
XP_017622647
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All DBs
Position
2:4693708..4698832
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AA seq
678 aa
AA seq
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MEKVVNMSHWRRKLVLWMIMVVQLSLFLSVSSTEIHARKLLKDNDINTNDVRLHISDRQV
IIDNGLVEVTIENPSGYLIGIKYKEMENVLERRNHNSNRGYWDIVWDDDAYDKLETKHVE
VITQTNDIVELSFTKTWNSKNHGKTLPLNIQKRYIVRRGISGVYMYGIFERQEDFPEAHM
YQIRIAFKLKEDKFRFMAISDTIQRVMPQSEDRIKGHSKPLDFKEAVLLTNPSNPNLKGE
VDDKYQYSTENKDNKLNGWISDYDAVGFWIMTPSNEFRTGGPHKQDLTSHVGPTALSMFV
STHYTGTEIDTFYKEGEAWKKVFGPVLIYLNSASSKDDDYRKILRDDAKRQLSEEIESWP
YNFTRSEDFPHSQQRGQVNGQLLVQDRYMDKQLMQAKSAFVGLAAPGEVDSWQKEGKGYQ
FWTQTDKIGRFNIKNVRPGVYNLYAWIHGFIGSYKLDLNITIQPENKIELGTLIYDPPRN
GPTLWEIGIPDRTAAEFFIPEPYPQYVNSITNDGADKFRQYGLWDRYSNIYRDSDLVYTV
GASNYSKDWFFAHVPRKTGDDRYRPTTWQIKYNLQDVNNRGTYTLQMAIAAASFAEVEVR
FNDPNSDRPHFTTRRIGYDNAVPRHGIHGLYRLYSIEVPEYRFRKGNNTIYLTQTRSDNP
FEAVMYDYIRLEGPNSLV
NT seq
2037 nt
NT seq
+upstream
nt +downstream
nt
atggagaaggtggtaaacatgagccattggagaagaaagcttgttttgtggatgataatg
gtggttcaattatcactgtttctctctgtttcctctactgaaatccatgccagaaaactc
ctaaaggacaacgacattaacactaatgatgtccggttacacataagtgatcgccaagtg
attattgataatggacttgttgaagtcactattgagaatccatctggttacttgatagga
attaaatataaagagatggaaaatgtacttgaaaggagaaaccataattccaatagaggg
tactgggacattgtgtgggatgatgatgcctatgacaaactggaaactaaacacgtcgag
gtcattacacaaactaatgacattgtagagctttcctttaccaaaacatggaattctaaa
aaccatggaaagacacttcccctgaacatacaaaaaaggtacatagtccggcgcggcatc
tcgggggtctacatgtacggtattttcgagcgccaggaagattttccggaagctcatatg
taccaaataaggattgctttcaagctcaaggaagacaagtttcggttcatggcgatatcg
gacacaatacaacgggtcatgcctcaaagtgaagatcggatcaaaggtcatagtaagcct
cttgacttcaaagaagctgttttattgacaaatccgtcaaatccaaatcttaaaggggag
gttgatgataagtatcaatattctactgagaataaagataacaagcttaacggttggata
tcggactacgatgctgtcggtttttggataatgacccctagtaatgagtttcgaaccggt
ggtccgcataaacaggaccttacttctcatgtcggtccgactgctctttcgatgtttgtt
agtacgcattataccggaaccgaaattgacacattctataaggaaggagaggcttggaaa
aaagtttttggtccggttttgatctatcttaattctgcttcttcaaaggacgatgattac
cgcaagatcctgcgggatgatgctaaaagacagttgagtgaagaaattgaaagttggcct
tacaattttactcgatcagaagattttcctcactctcaacaacgaggacaagttaatgga
caactgctagtgcaagaccggtacatggataagcaattaatgcaggcaaaatctgccttt
gtggggttggccgcccctggagaggttgattcatggcaaaaagaaggaaagggctaccaa
ttttggactcaaaccgacaagattggtcgtttcaacataaaaaatgtccgaccaggggtg
tataatttgtatgcttggatccatggtttcattggaagctacaaattagatctcaatatc
actatccaaccagaaaataagatcgaattgggtacacttatatatgatccaccaagaaat
ggaccaacattgtgggaaattggaattccagacaggacagcggccgagttcttcatacct
gaaccatacccacaatatgtcaattcaattaccaatgatggcgcagacaaattcaggcaa
tatggattgtgggaccgatactcgaatatttatcgtgatagtgaccttgtctacactgtg
ggtgcaagcaactattcaaaggattggttctttgctcatgttccaaggaaaaccggggac
gataggtaccgaccaacaacgtggcaaatcaaatacaatctccaagatgtaaacaataga
ggaacctacactctccaaatggcaatagcagcagcttcttttgcagaagtagaggttcga
ttcaacgatccaaattccgatcgacctcattttacaaccagaagaatcggttacgacaac
gccgtaccaaggcacgggattcacggattgtacagattgtacagcattgaagtacctgaa
tatagatttcgtaaagggaacaacacaatatatctaactcagacaagaagtgacaaccct
tttgaagctgtaatgtatgattacattcgattagaagggcctaatagtttagtttaa
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