Gossypium arboreum (tree cotton): 108466925
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Entry
108466925 CDS
T05776
Name
(RefSeq) elongation factor 1-alpha-like
KO
K03231
elongation factor 1-alpha
Organism
gab
Gossypium arboreum (tree cotton)
Pathway
gab03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
gab00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
108466925
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gab03019
]
108466925
03016 Transfer RNA biogenesis [BR:
gab03016
]
108466925
03012 Translation factors [BR:
gab03012
]
108466925
04131 Membrane trafficking [BR:
gab04131
]
108466925
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
gab04147
]
108466925
Messenger RNA biogenesis [BR:
gab03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
108466925
Transfer RNA biogenesis [BR:
gab03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
108466925
Translation factors [BR:
gab03012
]
Eukaryotic type
Elongation factors
108466925
Membrane trafficking [BR:
gab04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Other CMA associated proteins
108466925
Exosome [BR:
gab04147
]
Exosomal proteins
Proteins found in most exosomes
108466925
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
MMR_HSR1
GTP_EFTU_D4
FlpD
AAA_22
Semialdhyde_dhC
Gtr1_RagA
Motif
Other DBs
NCBI-GeneID:
108466925
NCBI-ProteinID:
XP_017622793
UniProt:
A0A0B0N991
LinkDB
All DBs
Position
2:113699361..113701804
Genome browser
AA seq
447 aa
AA seq
DB search
MGKEKVHINLVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL
DKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTT
GGFEAGISKDGQTREHALLAFTLGVRQMICCCNKMDATTPKYSKARFDEIVKEVSSYLKK
VGYNPEKIPFVPISGFEGDNMIERSTNLDWYKGPTLLEALDQITEPKRPSDKPLRLPLQD
VYKIGGIGTVPVGRVETGVLKPGMVVTFGPTGLTTEVKSVEMHHESLPEAFPGDNVGFNV
KNVAVKDLKRGFVASNSKDDPAKEAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKF
SELLTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSEYPPLGRFAVRDMRQT
VAVGVIKSVEKKDPTGAKVTKSAAKKK
NT seq
1344 nt
NT seq
+upstream
nt +downstream
nt
atgggtaaggagaaggttcacatcaaccttgttgtcattggccatgtcgactctggcaag
tcgaccactactggtcatttgatctacaagcttggtggtattgacaagcgtgtgattgag
aggttcgagaaggaggctgctgaaatgaacaaaaggtcattcaagtatgcttgggtgctt
gacaagcttaaggctgagcgtgaacgtggtatcaccattgatattgccctgtggaagttt
gagaccaccaaatactattgcaccgttattgatgcacctggacaccgtgactttatcaag
aacatgattaccggtacctcacaggctgactgtgctgttctcattattgactcaaccact
ggtggttttgaagctggtatctctaaagatggtcagactcgtgagcatgctttgcttgct
tttaccctcggtgttaggcagatgatttgctgctgcaacaagatggatgcaacaacccca
aagtactcaaaggcaaggtttgatgaaattgtcaaggaagtctcttcttatcttaagaaa
gttgggtacaaccctgagaagatcccgtttgttccaatctccggttttgagggtgacaac
atgattgagagatctacaaacctcgattggtacaagggtcctactctccttgaggctctt
gaccagatcaccgagcccaagaggccctcagataagccacttcgtcttccacttcaggat
gtctacaagattggtggtattggaactgtccctgttggtcgtgttgaaactggtgtcctc
aaacccggtatggttgttacttttggtcctactggtctgaccactgaagttaagtctgtt
gagatgcaccatgaatccctcccggaagctttccctggtgacaatgttgggttcaacgtt
aagaacgttgctgttaaggatcttaaacgtggttttgttgcttcaaactccaaggatgat
ccggccaaggaagctgccaacttcacctcacaggttatcatcatgaaccaccctggccaa
attggaaatggttatgccccagtcctcgactgccacacctctcacattgctgtcaaattt
tctgagctgttgaccaagattgacagacgatctggcaaggaactcgagaaggaacccaag
ttcttgaagaacggtgatgcaggtatggtaaagatgattcccaccaaacccatggtggtt
gagactttctccgaatacccaccactcggacgttttgctgtccgtgacatgcgccagacc
gttgctgtcggtgtcatcaagagtgttgagaagaaggacccaactggtgctaaggtcacc
aaatctgctgccaagaagaaatga
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