Gossypium arboreum (tree cotton): 108467026
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Entry
108467026 CDS
T05776
Name
(RefSeq) alpha-L-arabinofuranosidase 1
KO
K01209
alpha-L-arabinofuranosidase [EC:
3.2.1.55
]
Organism
gab
Gossypium arboreum (tree cotton)
Pathway
gab00520
Amino sugar and nucleotide sugar metabolism
gab01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
gab00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00520 Amino sugar and nucleotide sugar metabolism
108467026
Enzymes [BR:
gab01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.55 non-reducing end alpha-L-arabinofuranosidase
108467026
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GFIT
Motif
Pfam:
ASD1_dom
Alpha-L-AF_C
CBM_4_9
Motif
Other DBs
NCBI-GeneID:
108467026
NCBI-ProteinID:
XP_017622968
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Position
2:109369320..109380003
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AA seq
675 aa
AA seq
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MGYWKVPCVFLLCLFISFCLPCQLLADEVDKNLTAQLFIDASERSSRPIPQTLFGIFFEE
INHAGAGGLWAELVSNRGFEAGGANIPSNIDPWSIIGDESSIIVSTDRSSCFERNKVALK
MEVLCNSEGTHICPSGGVGIYNPGFWGMNIEQGKSYKIVFYVRSTGEIDISVSFTSSDGL
QTLSSTNIKASASDVSNWTKMEVLLEAKETNRNSRLQLTTSKNGVVWFDQVSAMPLDTYK
GHGFRNELVEMLADIKPRFIRFPGGCFVEGEWLRNAFRWKASVGPWEERPGHFGDVWMYW
TDDGLGYFEFLQLAEDLGALPIWVFNNGISHNDQVDTSSVLPFVQEALDGIEFARGDASS
TWGAVRAAMGHPDPFDLKYVAIGNEDCGKKNYRGNYLKFYDAIKRAYPDIKIITNCDGSS
RPLDHPTDLYDFHVYTSANNLFSMSHQFDRTTRQGPKAFVSEYAVTGKDAGTGSLLAALA
EAAFLIGLEKNSDVVHMASYAPLFVNSNDRRWNPDAIVFNSFQAYGTPSYWVQRFFTESS
GAILLNATLQKDSSNSLVVSAITWKNSEDGQTYIRIKVVNFGSNSVNLQISVDGLDPNSV
KLSGSTKTTLTSANLMDENSFKEPKKVAPIQTLLEDAHKEMSVLLLPHSFTSFDLLKESA
SLRITEDDSSLVSSI
NT seq
2028 nt
NT seq
+upstream
nt +downstream
nt
atgggttattggaaggttccttgtgtgtttttactatgcctcttcatcagtttctgcctt
ccctgtcaattgttggctgatgaagttgacaaaaacctgacagctcagctgtttatagat
gcttccgaacggtcaagccgtccaatacctcaaacactgtttggaatattctttgaggag
atcaaccatgctggtgctggtgggctgtgggcagagcttgtaagcaacagaggatttgaa
gctgggggtgctaatattccttcaaacattgacccatggtccataattggggacgaatca
tctataattgtatcaacagaccggtcgtcctgttttgaacgtaacaaggtggctctcaaa
atggaagtgctctgtaatagtgagggcactcatatctgtccatctggaggagttggtata
tataacccagggttctggggcatgaatattgagcaagggaagagctacaagatcgtattt
tatgttcgctcaacaggagaaattgacatttctgtatcttttacgagctcagatggcttg
cagacactatcctccaccaacataaaagcttctgcttctgatgtttcaaactggacaaag
atggaggttctgttggaagccaaggaaacaaatcgcaattcaaggctgcaactaacaaca
tcgaaaaatggtgtggtatggtttgatcaagtttcagctatgcctttggacacttacaag
gggcatggtttccgaaatgagcttgttgaaatgcttgcagatatcaaacctcgctttatt
agatttccaggtggctgttttgtggaaggtgaatggttaagaaatgcttttcgctggaaa
gcaagtgttggaccttgggaagaaagaccagggcactttggtgacgtttggatgtactgg
actgatgatggacttggttactttgagtttcttcaattagcagaggatcttggtgcattg
ccaatatgggtgttcaacaatggaattagtcataatgatcaagttgatacatccagtgtt
ctgccttttgtgcaagaggcccttgatggcattgagtttgctagaggtgatgctagttct
acatggggtgctgttcgagctgcaatgggacaccctgaccctttcgatttgaaatatgtt
gctattgggaatgaggattgtgggaagaagaattatcgaggaaattacctcaagttctat
gatgctataaagcgggcctacccagatatcaaaatcattacaaactgtgatggatcttct
cgcccgcttgaccacccaactgatctttatgattttcatgtttatacatctgcgaacaac
ttgttttccatgtcccatcaatttgatcgtacaacacgacagggtccaaaggcctttgtt
agtgaatatgctgtgactgggaaagatgctggcactggaagtcttttagcagcacttgct
gaggctgcattccttattggtctggaaaagaacagcgatgttgtgcatatggctagctat
gcaccactttttgtgaattccaatgacagacggtggaacccagatgcaatcgtcttcaac
tcctttcaggcgtatggaactcctagctactgggtgcaacgtttcttcacagaatcaagt
ggagcaattcttcttaatgcaacactgcaaaaagattcctctaattcccttgttgtatct
gcaattacttggaaaaattcagaggatggtcaaacctacataaggataaaggttgtaaac
tttgggagcaattcagtcaacctccaaatttctgttgatggattggatccaaattctgta
aagctgtctggatcaacaaagaccactctcacatctgctaatctgatggatgagaattcc
ttcaaggagccaaagaaggtcgcacctattcaaacactgctggaagatgcgcacaaggag
atgagtgtgctactgctaccacattctttcacttcatttgatttgttaaaagagtctgcg
agtcttagaattacagaagatgattcttctctcgtatcttccatctga
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