Gossypium arboreum (tree cotton): 108467072
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Entry
108467072 CDS
T05776
Name
(RefSeq) transcription initiation factor TFIID subunit 6
KO
K03131
transcription initiation factor TFIID subunit 6
Organism
gab
Gossypium arboreum (tree cotton)
Pathway
gab03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
gab00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
108467072
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gab03021
]
108467072
03036 Chromosome and associated proteins [BR:
gab03036
]
108467072
Transcription machinery [BR:
gab03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
108467072
Coactivators
SAGA/TFTC/STAGA complex
108467072
Chromosome and associated proteins [BR:
gab03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
108467072
STAGA complex
108467072
TFTC complex
108467072
SAGA complex
108467072
SLIK complex
108467072
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF6_C
TAF
Histone
CBFD_NFYB_HMF
TFIID-31kDa
Motif
Other DBs
NCBI-GeneID:
108467072
NCBI-ProteinID:
XP_017623086
UniProt:
A0A0B0N2L0
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All DBs
Position
7:complement(91436675..91441535)
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AA seq
534 aa
AA seq
DB search
MSIVPKETIEVIAQSIGINNLSDDAALSLAPDVEYRMREIMQEAIKCMRHSRRTILTTDD
VDGALNLRNVEPVYGFTSGGPLQFKRAIGHRDLFYIDDRDVDLKDVIEAPLPKAPLDTGV
VCHWLAIEGVQPAIPENAPVGAIAAPSNGTTYEQKEELPVDIKLPVKHVLSRELQLYFDK
ITELTLRKSDSTLFKEALVSLATDSGLHPLVPYFTYFISDEVSRGLNDYSLLFALMRVVW
SLLQNPHIHIEPYLHQLMPSVVTCLVSKKLGNRIADNHWELRDFTAKLVASICKRFGHVY
NTLQTRLTKTLLNALLDPKRALTQHYGAVQGLAALGPNVVRLLILPNLEPYLRLLEPELL
LEKQKNEMKRYEAWRIYGVLLRAAGQSIFERLKNFPPLPSTPAHALWKSKEKVVTEAPNK
RKASTEPMEHEPALKKIVTDGPTTVSANSSPSPMQVETVTTLTSPGQYEAGQPSSSEKMA
NRVGKDGKILKKSAILNQIWKDDLNSGRTLVTLFELFGESILSFIPSPEMSLFI
NT seq
1605 nt
NT seq
+upstream
nt +downstream
nt
atgagcatagtgccgaaggagacgatcgaagtgatagctcaaagcataggcataaacaat
ttgtcagatgatgctgctctttctcttgctcccgatgttgagtatcgcatgcgcgagatc
atgcaggaggcgattaaatgtatgcgtcactcaaggaggactatattgactacagatgat
gttgatggtgcacttaacttaagaaatgttgagcctgtatatggctttacatctggaggt
cctttgcagttcaaaagggctattgggcatagggatttgttttacattgatgatagggat
gtggatttgaaagatgttattgaagctcctttaccaaaagcaccgcttgatactggagtt
gtttgtcactggcttgccattgagggagtacaacctgctattccagaaaatgcacctgtg
ggagcaattgctgctccttctaatggcactacttacgaacaaaaggaggagctccctgtt
gacattaaattacctgttaagcatgttctatctagggagcttcagctctattttgataag
atcacggagctaactttgagaaagtctgattcaacactgtttaaagaagcattagtgagt
ttggctacagattcaggacttcatccattagttccttatttcacttactttatatctgat
gaggtttctcgtggtttaaatgattactctcttctatttgctttaatgcgtgttgtttgg
agtcttctccaaaatcctcacatccacatagaaccttatctgcaccaattgatgccatct
gtagtgacctgccttgtttctaaaaaattagggaacaggattgctgacaatcactgggaa
cttagagattttactgcaaagttagttgcttctatatgcaaaagatttggccatgtttat
aacactcttcagacgcgtcttacaaaaactttgctcaatgcacttctggacccaaaacgg
gcattgacccaacactatggtgcagttcaagggttggctgccttaggaccaaatgtggtt
cgtctccttattctaccaaatcttgagccataccttcgactccttgaaccagagttgtta
ctagagaagcaaaagaatgagatgaagagatatgaagcttggcggatttatggtgtcttg
ctgcgtgcagcgggtcaaagcatatttgagcgcctcaaaaattttccacctttaccatca
actccagcccatgctctctggaagtccaaagaaaaagttgttactgaagcgccaaataaa
cgcaaggcgagcacagagcccatggaacacgaaccagccttgaagaaaatagtaactgat
ggccccaccacggtttcagccaactcctcaccatctcccatgcaagttgaaacggtgaca
acacttacttcaccaggtcaatacgaagcaggccagccatcatcatctgaaaagatggcc
aatagagttggaaaagacggtaaaatattgaagaaatcagccatccttaatcaaatttgg
aaggatgacttgaattctggacgtacattggtaacgttgttcgaactgtttggtgaaagc
attctctccttcattccatctcctgagatgtctttgtttatataa
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