KEGG   Gossypium arboreum (tree cotton): 108467129
Entry
108467129         CDS       T05776                                 
Name
(RefSeq) DNA-repair protein XRCC1 isoform X1
  KO
K10803  DNA-repair protein XRCC1
Organism
gab  Gossypium arboreum (tree cotton)
Pathway
gab03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:gab00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    108467129
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:gab03400]
    108467129
DNA repair and recombination proteins [BR:gab03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Short Patch-BER factors
     108467129
SSDB
Motif
Pfam: BRCT BRCT_2 PTCB-BRCT RTT107_BRCT_5 EF-hand_7
Other DBs
NCBI-GeneID: 108467129
NCBI-ProteinID: XP_017623140
LinkDB
Position
2:complement(22885189..22892607)
AA seq 367 aa
MSDSKTSQGGGAGKTQTRNLPSWMSSRENESKSHGNKSNDAKGHDKGHASSSNNTNFSKL
LEGVVFALSGFVNPERSTLRSQALAMGAEYQPDWNSNCTLLACAFQNTPKFRQVEADCGT
IISKEWILECYAQKKLVDIDPYLMHAGKPWRRSSISHETSQGVLAEKQGSSLTKSYKKVE
ETQSKTTSGPSKNKASQLAQDRFSPPKVKKWVMDDFNETISWLESQEEKPEPQEIKQVAG
EGILTCLQDAIDCLAQKQDVQQITEQWSFIPRVVKELAIFDASNHGSLTKEDLLREAKVC
KQIYEDELSRINSGSLKRKRPKTDGGEEGNKGETKAIFASGYDSDETIKMTEEEIELAYK
NFNSGTL
NT seq 1104 nt   +upstreamnt  +downstreamnt
atgtctgattcaaaaacaagccaaggtggcggtgctggaaagacccagactcgaaatctt
ccatcatggatgagttcaagagagaatgaaagtaaatcccatggaaacaagtccaatgat
gccaaaggacatgataaggggcatgcttctagttctaacaacaccaacttttccaaactt
ttggaaggggtggtctttgcattgtcaggatttgttaatccggaacgtagtacattacgt
tcccaggctttggcaatgggagctgaatatcagcctgactggaattcaaattgcacgctt
ttggcatgtgcttttcaaaataccccgaagtttcgacaagttgaagctgattgtggaaca
attatatcaaaggaatggatattagaatgttatgcacagaaaaagcttgtcgatattgat
ccttacctcatgcatgctgggaaaccttggcgaagaagtagcatttctcatgaaactagt
caaggggtgcttgcagaaaaacaaggatcgtcattaacaaaatcttacaagaaggttgaa
gaaacacaatcaaagacaacttctggtccctccaagaataaagcatctcagcttgctcag
gacagattttctcctcctaaagtgaagaagtgggtaatggatgattttaatgaaactatt
tcatggctggagagtcaagaggaaaagcccgaaccgcaggagataaagcaagtagctgga
gaagggatcttaacttgtttacaagatgccatagattgtcttgcgcaaaagcaggatgtg
cagcaaattactgagcagtggagcttcatccctcgtgtggtcaaggagcttgccatcttc
gatgccagtaaccatggctcactcaccaaggaagatcttttgagagaggccaaggtatgc
aagcaaatatacgaggatgaattaagccggataaacagtggttctttgaaaagaaaaagg
ccaaagactgatggaggtgaagaaggcaacaagggtgaaaccaaagccatttttgcatca
ggttatgacagtgatgaaacaatcaagatgacggaggaagaaatcgagcttgcttataaa
aatttcaattctggaactttgtaa

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