Gossypium arboreum (tree cotton): 108467143
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Entry
108467143 CDS
T05776
Name
(RefSeq) uncharacterized protein LOC108467143 isoform X1
KO
K13091
RNA-binding protein 23/39
Organism
gab
Gossypium arboreum (tree cotton)
Brite
KEGG Orthology (KO) [BR:
gab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
gab03041
]
108467143
Spliceosome [BR:
gab03041
]
Common components
Common spliceosomal components
General mRNP proteins
108467143
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RBM39linker
RRM_occluded
RRM_7
Motif
Other DBs
NCBI-GeneID:
108467143
NCBI-ProteinID:
XP_017623171
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All DBs
Position
2:8704196..8710115
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AA seq
581 aa
AA seq
DB search
MDFDEYEYLEKTVEEQEDSKKKTKDGGGVGDKNERSYRKRDSERDEEDDEGKSSSKKSRS
GREEDDEERRDRDKDRRRSSRDRERERERQRDRDRDLERRSSRGREKEKDRERDRERERR
DRDKEKEKEKEREKERREREKERERREREKEKERERERRERSSSRSRRHESEREREKERD
RERDIDIRDSRRFKDTKEATEPEADPERDQRTVFAYQMPLKATERDVYEFFSKAGKVRDV
RLIMDRNSRRSKGVGYIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKNLVQSNTSGA
GTGGVAGPYGAVDRKLYVGNLHFNMTEMQLRQIFEPFGPVELVQLPLDLETGQCKGFGFV
QFAQLEHAKAAQSALNGKLEIAGRTIKVSSVTDHVVTQDTAAKSADFDDDEGGGLALNAQ
SRALLMRKLDRSGIATSITGSLGVPLLNGSAPNPQAVTLPVNGQAAYPTPILPPIMSTTA
LDSVGQPSECLLLKNMFDPATETEPDFDLDIKEDVEEECSKYGRVKHIYVDKNSAGCVYL
RFDSAEAAGKAQRAMHMRWFAGRSISALFMQPQEYEARFKC
NT seq
1746 nt
NT seq
+upstream
nt +downstream
nt
atggatttcgacgagtacgagtatttggagaaaaccgtggaggagcaggaagattcgaag
aagaagaccaaagacggaggaggagtgggggataagaacgagagaagctataggaagaga
gatagcgagagagatgaagaggatgatgaaggcaagagtagtagcaagaaatcgagaagc
ggtcgcgaagaggatgacgaggagaggcgagatcgtgacaaagatcggcgtagaagcagc
cgtgatagagaaagggaaagggaaaggcagagagatagggatagagatttagagaggagg
agcagtagaggaagggaaaaggaaaaagatagagaaagggatagggaaagagaaaggaga
gatagggataaggagaaagagaaagagaaagagagagagaaggagaggagagagagggaa
aaggagagagagaggagagaaagggagaaggagaaggaaagggagagagagaggagagag
aggagcagcagtaggtcgaggaggcacgagagtgagcgcgagcgagagaaggagcgggac
agagaacgtgacattgacatcagagacagcaggagatttaaagatacgaaggaagcaaca
gagcctgaagctgatcctgagagggaccagagaaccgtttttgcttatcagatgcctcta
aaagcaacggagagagatgtctatgagttcttctcaaaagcaggaaaggtgagggatgtt
cggctgatcatggataggaactcaagacgatcaaagggagttgggtacattgagttttat
gatgtgatgtctgttccaatggcaatagcgttgtctggtcaactgcttcttggtcaacct
gtgatggttaaaccttctgaggctgaaaagaatcttgttcagtccaatacttctggtgca
ggcacaggtggtgttgctgggccatatggagctgttgatagaaaattgtatgtgggtaac
ctgcacttcaatatgacagaaatgcagcttagacagatatttgaaccttttggcccagtt
gagcttgtacaactaccacttgaccttgagactgggcagtgcaaaggttttggatttgtt
cagtttgctcaacttgaacatgcaaaagcagctcaaagtgcattgaatggaaagctggag
attgctggtcgaaccattaaggtttcatctgttacagatcatgttgttacccaagatact
gcagcaaaatctgctgacttcgatgatgatgagggtggtggcttggccttgaatgctcaa
tcaagggcattgcttatgcggaagctggaccgctctggtattgcgacaagcattacgggc
tcccttggagtacccctccttaatgggtcagctccgaatccacaggctgttactttacct
gtcaatggccaagctgcatatccaacaccaattctacctccaatcatgtctactacagca
cttgattctgttggccagcccagtgaatgtttgctgctgaagaatatgtttgatcctgca
actgagacggaaccagattttgatttggatattaaagaggatgtcgaagaagaatgcagc
aaatatggcagggtgaagcatatatatgtagacaagaacagcgctggatgcgtctatctg
cgatttgactccgcagaagcagcaggtaaagctcaacgtgcaatgcacatgaggtggttt
gcaggccgatcaatatcagccttatttatgcaaccccaggagtacgaagcgaggtttaaa
tgctga
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