Gossypium arboreum (tree cotton): 108467257
Help
Entry
108467257 CDS
T05776
Name
(RefSeq) uncharacterized protein LOC108467257 isoform X1
KO
K17925
sorting nexin-13
Organism
gab
Gossypium arboreum (tree cotton)
Brite
KEGG Orthology (KO) [BR:
gab00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
gab04990
]
108467257
Domain-containing proteins not elsewhere classified [BR:
gab04990
]
Phox homology (PX) domain-containing proteins
Sorting nexins
108467257
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PXA
Nexin_C
PX
Motif
Other DBs
NCBI-GeneID:
108467257
NCBI-ProteinID:
XP_017623339
UniProt:
A0A0B0PUV8
LinkDB
All DBs
Position
2:complement(23967440..23974954)
Genome browser
AA seq
1126 aa
AA seq
DB search
MDMPKQVTVRDLVEEARKRIVIFAICVVGLSYLMSLTSSSVLVNLPAAASLIILLRYISI
DYEMRRNAAVYNRKSASMSSLTPKQPPEHPKVVYPSDWRRKVNSPIVEDAIDHFTRHLIS
EWVTDLWYSRLTPDREGPEELVLIINGVLGELSDRMKNINLIDLLTRDLINLICTHLELF
RVNKAKIEKQQSIPLTIEHQDAAIRCVMAAENKLHPALFSTEAEHKVLQHLMGGFISFTF
KPEDLQCSFFRYVARELLACAVMRPVLNLVSPRFINERIESAIISMTKAKGVDAAEGASQ
YKSNGSSRIPSDHFSKFLDPSVTGVELVQLKTDQSRAAGGTTATDNLNRAHLMKDPLLSM
DTRSSHSWSSVTLNSQTSAGKGIEQHRTGGEWGDMLDIISRRKTEVLAPENFENMWTKGR
NYKKKEKRLIEQVPQHYSAGSPATVDHSKAISKTREKCPTKLNTSDRCAAQSTLTDQRKI
EKLFLKEASNVSYYSSVASCQEDDERSLVDLEEVESESSDSFSSEEETGTVTGIGSPGTK
VWDGKSNRNLAVSHIHHPLENPEGHMAKKAGRRHVQYRRLTRTPSSRKRSRLTCQKLPVW
QEVDRSSFISGDGQDILNSPNGHEKADDSSNNSETEFFGRLHSGATASISSHNLTINSLQ
NSLVVDSFFKLRCEVLGANIVKSGSKTFAVYSISVTDVNNNNSWSIKRRFRHFEELHQRL
KQFPEYKLHLPPKHFLSTGLDVHVIRERCKLLDGYLKNLLQFPTISGSIEVWDFLSVDSQ
TYVFSNSFSIIETLSVDLDSNPSEKSNKASSVLVPLVGPLSSKGEQLDTESKEYARQMKP
NLAMDGLRNAKNMSYPPKVLTKEQGNSIEDSGSNSDTGMSKISFVRHTEKNVKGKANDGM
EDASELVLDAVLHPTFPTEWVPPNLSVPILDLVDVIFQLQDGGWIRRKAFWVAKQILQLG
MGDAFDDWLIEKIQMLRKGSVVASGIERLEKILWPDGIFITKHPRQQHPPSSSGPSKASP
CSPLPPETCSSRLGDEQQQLEAERRAKFVYELMIDNAPAAIVGLVGRKEYEQSAKDLYFF
IQSSVCLKLLAYDLLELLLLSAFPEMEYVFKQFHVEKHKFGEFKSN
NT seq
3381 nt
NT seq
+upstream
nt +downstream
nt
atggacatgccaaagcaggtgacggttcgtgacttggtggaggaagccaggaagcggatc
gtgatttttgctatctgcgtcgttggattgtcctatctcatgtcactgacaagttcctca
gttttggttaatcttcctgctgctgcctccttaatcattctcctacgatacatttcaata
gattatgaaatgcggaggaacgctgctgtatacaacagaaaatctgcatcaatgagttca
ttgactccaaaacaaccaccagagcatcctaaagttgtttatccttctgattggagaagg
aaagtgaattctcctattgtagaggacgcaatagatcacttcacaagacatcttatatct
gagtgggtgacagatctatggtattctcgtttaacacctgatagggaaggcccagaagaa
ctggtgctgatcataaatggtgttcttggggagctttcagaccgcatgaaaaatataaat
ctcatcgatttactcacaagggaccttattaatctcatttgtactcacttggagcttttt
cgtgtgaataaagcaaaaattgaaaagcaacaatctataccgctgactattgaacatcaa
gatgctgcaataagatgtgttatggctgcagagaacaaactgcacccagctttattctct
actgaagctgagcacaaggtgttgcaacatttgatgggtggttttatatctttcacattc
aaacctgaagatctgcaatgttctttctttcggtatgttgccagggaacttctggcttgt
gcagtaatgcgaccagtcttaaacttagtgagtccaaggtttataaatgagagaattgaa
tctgctattatatctatgaccaaagctaaaggagtcgatgctgcagaaggtgcatctcaa
tacaaatcaaatggctcctcaaggatcccttctgatcatttttctaagtttctagatcct
tctgtaactggtgttgaactggtacaattaaaaactgatcagtccagagctgctggaggc
accactgcaacagataacctaaacagagcacatctaatgaaggatccactgctttccatg
gatactcgatcttcccattcttggagctctgtgactttgaactctcaaactagtgctgga
aaaggtatcgagcaacatcgtacaggaggagaatggggtgatatgttagatatcatttcc
cgtagaaagactgaggtacttgctccagaaaattttgagaacatgtggacaaaagggaga
aactacaaaaagaaggaaaaacgattgattgagcaagttcctcagcattactctgctggg
agccctgctacagtggatcattcaaaagcaatatctaagacaagagagaagtgtcctacc
aagcttaacacatctgataggtgtgcagctcaatctacattaactgatcagcgcaaaata
gaaaaattattcctaaaagaagctagcaatgtatcgtactactcttcagttgcatcttgt
caggaagatgatgaacgcagccttgttgatttggaggaggttgaatcagaaagcagtgat
tctttttcttcagaagaagaaacaggaactgtaacgggtattggttctccaggaaccaaa
gtttgggatggcaagagtaacagaaatctggcagtttcgcatattcatcatccacttgaa
aatcctgaaggccatatggcaaagaaggctggtagaaggcatgttcagtatcgaagatta
accagaaccccatccagcagaaaaagatcgagattgacctgtcagaagttgcctgtctgg
caagaggtggataggtctagctttatatcaggggatggacaggacatacttaattcaccg
aatggacatgagaaagctgatgactccagcaataattctgagactgaattctttggtaga
cttcacagtggagctactgcttctatctctagtcataatttgactattaattccttgcaa
aactcgttggtggtagattctttctttaaattgagatgtgaggttttgggtgcaaatatt
gtgaagagtggctccaaaacatttgctgtttattccatatctgttacagatgtaaacaac
aataatagctggtcaataaagagaagattccgacattttgaggagttgcatcaacgtctt
aaacaatttccagagtataaacttcacttgcctccaaagcattttctctcaacaggtttg
gacgttcatgtaatacgagaacggtgtaaattgcttgacggatatttaaagaatctcctg
cagtttcctactatttcaggatcaattgaagtttgggacttcctaagtgttgactcccag
acatatgtattctcaaattctttttctatcattgagacattgtcagttgaccttgacagt
aatccatctgaaaagagcaacaaggcctcaagtgttttggtgcctctggtgggtccttta
tcttctaagggagaacagttagacactgaaagcaaggaatatgcacggcagatgaagcca
aatcttgcaatggatggattaagaaatgcaaaaaatatgtcttatcctccaaaagttctc
actaaagaacagggtaactccattgaagattcaggcagtaattctgatactggaatgtca
aagatttcatttgtaagacacacagagaagaatgttaaaggaaaagcgaatgacggaatg
gaagatgcttctgagttggttcttgatgctgttttgcacccaacctttcctacagagtgg
gtgcccccaaatttaagtgtccccattttagatttggtggatgtcattttccagctccaa
gatggcgggtggatcaggaggaaggctttttgggtggccaaacaaatcctacaacttgga
atgggtgatgcttttgatgattggctgatagaaaagatccagatgctgcgcaagggctca
gttgttgcttcaggaatcgagcgtcttgagaagatactttggcctgatggtatattcata
accaaacatccaaggcaacaacatccgccatcatccagtggcccttccaaggcttcacct
tgcagtccgctacctcctgaaacatgttcatctagattgggtgatgagcagcaacaacta
gaagcagaacgtcgtgcaaaattcgtatatgagctaatgattgacaatgcaccagctgct
attgtgggtcttgttggtcgcaaggagtatgaacaatctgctaaggacctctatttcttc
attcagtctagtgtttgtttgaagctgctggcatatgatcttcttgagctcttgctgttg
tctgcatttccagagatggagtatgtattcaagcagttccatgtagaaaaacacaagttt
ggtgagtttaaatcaaactaa
DBGET
integrated database retrieval system
