Gossypium arboreum (tree cotton): 108467264
Help
Entry
108467264 CDS
T05776
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 37-like
KO
K11594
ATP-dependent RNA helicase DDX3X [EC:
5.6.2.7
]
Organism
gab
Gossypium arboreum (tree cotton)
Brite
KEGG Orthology (KO) [BR:
gab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gab03019
]
108467264
03041 Spliceosome [BR:
gab03041
]
108467264
03036 Chromosome and associated proteins [BR:
gab03036
]
108467264
Enzymes [BR:
gab01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
108467264
Messenger RNA biogenesis [BR:
gab03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
108467264
mRNA cycle factors
Common to processing body (P body) and stress granule
108467264
Spliceosome [BR:
gab03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
108467264
Chromosome and associated proteins [BR:
gab03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
108467264
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
108467264
NCBI-ProteinID:
XP_017623349
UniProt:
A0A0B0PYG0
LinkDB
All DBs
Position
2:complement(110614195..110617888)
Genome browser
AA seq
621 aa
AA seq
DB search
MTTSWADSVADSASETVVSDNNSLRRPTRSTYVPPHLRNRPSSDTPNLSGPVTERTSFSG
TTGVSQWSRPSIGGGGGGTKPEIGRQGHVYGSSGRGGGGWNNRSGGWNRREREVNPFDDN
DEADVKDQAWDEQENSGINFDAYEDIPVEISGENVPPPVNTFVDIDLGELLNQNIRRCKY
VKPTPVQRHAIPIVLGGRDLMACAQTGSGKTAAFCFPIISGIMQEQYVQRPRVARTVYPL
ALILSPTRELSCQIHDEVKKFSYQTGVKVVVAYGGAPITQQLRELERGVDILVATPGRLV
DLLERARVSLQMIRYLALDEADRMLDMGFEPQIRKIVEQMDMPNRGVRQTMLFSATFPRE
IQRLASDFLANYIFLAVGRVGSSTDLIVQRVEFVQESDKRSHLMDLLHAQRENGAHGKQA
LTLVFVETKKGADSLEHWLCINGFPATTIHGDRTQQERELALRSFKSGKTPILVATDVAA
RGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKTGLATAFFNEGNLSMARPLAELMQE
ANQEVPAWLTRYASRAPYGGNKNRRYGGGGGGRFGGRDFRREGSVGRNLDHYGGGNSGTA
YGFPGNYGGGGYAPGMTSAWD
NT seq
1866 nt
NT seq
+upstream
nt +downstream
nt
atgacaacttcgtgggcagattctgtagcagactctgcatctgaaactgtagtttcagac
aacaattccttacgtcgtccaactcggtccacttatgtcccgccccaccttcgtaaccgt
ccatcttccgacacacctaacctttcaggaccggttactgagaggacaagttttagtggt
accaccggcgtgtcccaatggtcccggccaagcattgggggcggtggcggtgggactaag
cccgaaatagggcgtcagggtcatgtatatggctcttctggacgtggcggtggtggttgg
aacaatagaagtggtggttggaataggagagaaagggaagtaaatccatttgatgataat
gatgaagctgatgttaaggaccaagcatgggatgaacaagagaattcggggatcaatttc
gatgcttacgaggacattccggtggaaattagtggtgaaaatgtgccaccacctgtaaat
acatttgttgatatagatttaggggagcttttgaatcaaaacattaggagatgcaagtat
gtgaaaccgactccagttcaacgacacgctatccctatagtattaggaggtagagattta
atggcttgtgctcaaacagggtctgggaagacagctgctttctgctttccaattattagt
ggaattatgcaggaacagtatgtacagagaccgcgtgtagcacgaactgtttaccctctt
gctctcattttatctcccacaagggagctttcttgtcaaatacacgatgaggtgaaaaaa
ttctcatatcaaactggtgtcaaggttgtagttgcctacggaggggcaccaattacccaa
cagttgcgagagctggagagaggagttgatattctagtggcaactccagggcgattggtt
gatttgctagagagggctagagtatcattgcagatgataagatacttagcgctcgatgag
gcagatcgtatgcttgatatgggtttcgagccacaaatcaggaagatagtggaacaaatg
gacatgcctaatcggggtgtgcgacagacaatgttgtttagtgccacctttccaagagag
atacagagacttgcatctgattttcttgcaaattacatattcttggctgttgggagggtt
ggttctagcacggatttgattgttcaaagggttgaatttgttcaagagtctgataaaaga
agtcatctcatggatcttctgcatgcacaaagggaaaacggagctcatggaaagcaagct
ttgacattagtttttgtggagacaaaaaaaggagctgactcattggaacattggttgtgc
attaatggattcccagcaaccactatccacggtgataggactcaacaggaaagggaacta
gcattgagatctttcaagagcggaaagaccccaattttagtggcaacagatgtggccgct
cgtggtcttgatataccccatgtagctcacgtggtcaactttgatctccctaatgacatt
gatgattacgtccatcggattggaaggacagggcgtgccggtaaaacaggattggcaact
gctttctttaacgaaggcaatttgtcaatggcaaggccactagctgagctaatgcaagaa
gcaaatcaagaggtacctgcatggcttacccgatatgcatcccgggctccttacggtggt
aataaaaaccgacgatatggaggaggaggaggagggcgttttggtgggcgtgatttcaga
agggagggttcagttggtaggaacctagatcactacggcggaggtaatagtggcactgca
tatggatttcccgggaattatggcggaggaggatatgctccgggaatgacaagtgcttgg
gattag
DBGET
integrated database retrieval system
