Gossypium arboreum (tree cotton): 108467418
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Entry
108467418 CDS
T05776
Name
(RefSeq) UV-stimulated scaffold protein A homolog
KO
K23720
UV-stimulated scaffold protein A
Organism
gab
Gossypium arboreum (tree cotton)
Pathway
gab03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
gab00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
108467418
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gab03400
]
108467418
DNA repair and recombination proteins [BR:
gab03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
Other TCR factor
108467418
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UVSSA_N
DUF2043
AnfO_nitrog
VHS
DUF1400
Motif
Other DBs
NCBI-GeneID:
108467418
NCBI-ProteinID:
XP_017623510
UniProt:
A0A0B0NUM1
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Position
8:complement(27147005..27149745)
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AA seq
674 aa
AA seq
DB search
MAMPVEMEMEERGKVWALIEKATNSTASEVDPRLLKAIKSVVRFSDSELRLAAHTLMDLM
KRDHSQVRYLTLLIIDELFMRSRLFRTLLVENLDQLLALSVGFRRNMPLPAPPAIASTLR
SKAIEFLEKWNASFGVHYRQLRLGFDYLKNTLRFQFPNLQETAARIERERRERERRTREI
LQSKFETLKMNFSSVKEEIQATVDEIGECLDIVRTKEEGVPHVLLDDEDFVEFRSSELRQ
IRLDSLKEGEKVHENSDNKVVFDALRELYKLLVTKHLVSVQEWISLLVRVEVADNRSRDS
MLKELIDIRNSLISVKKDCEESGCTLPKTVNKNEEEEEDFWEEGNLGLTENGSTTEPEKR
REVQSSNIEKRSKSVEDRNSKKSNKQSGNLAKVSASCKVKAKDKECSCSKGKECSGSEKS
VRSELLAEAPVLRWGSFMDYWGSVSNKDTLLNQKGLEFDNHWGRVDYDAVIPAEKIAELN
LQSIVYQENLGEIQPCRAPLKKGGLCQRRDLKVCPFHGPIIPRDDAGNQINQSSSTDDTD
PGLGSDLAEQLAKQAVKNVRERDKEDARKRKLDKQSLQREKLARVREHNDAVLRDAAIAS
TSRSTVFGEDMGETVGENPVGRNKQTLASMLRKKVTTKDRLAQRLLNTRATEATLRQMTQ
GEDATYRETFPNQW
NT seq
2025 nt
NT seq
+upstream
nt +downstream
nt
atggcgatgccggtggagatggagatggaggagagaggaaaagtctgggctttgatagaa
aaagccacgaactcgactgcctccgaggttgatccacgtcttctcaaagcaatcaaatca
gtggtgcggttctccgattcggagctacgactcgccgcccataccctcatggacctcatg
aaacgcgatcattcccaggttcgttatctcacgcttcttataattgatgaacttttcatg
cggtctaggctttttagaacccttttggttgagaacttagatcagttattggccttaagt
gttgggtttagaagaaatatgccgctcccagctcctccggctattgcatcaactttgcgt
tccaaggcaattgagttcttagagaagtggaatgcatcttttggggttcattacaggcag
cttaggttaggttttgattatcttaagaatactctcaggtttcagtttcctaaccttcag
gagactgcagcaaggatagaacgagagaggagggaaagagagagaaggactagggagatt
ttacagagcaagtttgaaacgctgaagatgaattttagttctgttaaggaagaaatacag
gctacagttgatgagattggagaatgtttagatattgttcgcactaaagaggaaggcgtg
ccacacgtcttattggatgacgaagattttgtagagtttcggtcttctgagttgaggcag
atccgtcttgattcattaaaggaaggagaaaaggttcatgagaacagcgataacaaagtg
gttttcgatgcattaagagagctgtataagcttttagtaaccaagcacctggtttcagta
caagaatggatatctcttcttgtaagggttgaagtggctgacaacaggtcacgagattcc
atgttgaaggagttgattgatatccgaaacagtctcatatctgtgaagaaggattgtgaa
gaatctggttgtactttacccaaaactgtgaataaaaacgaagaagaggaggaagacttc
tgggaggaaggtaatttgggattgactgagaatggaagtactactgaacctgagaagcga
agggaggttcaaagttccaacattgaaaagagaagtaaatctgttgaggataggaattct
aagaagtctaataaacagagtggaaatcttgctaaagtgtcagcttcttgcaaggtgaaa
gccaaagataaagaatgcagttgttctaagggcaaagagtgttcgggtagtgaaaagtct
gttaggagtgagcttttggctgaagctccagttctcaggtggggttctttcatggattat
tggggctcagtctctaataaggatacattattaaatcagaaaggcttggagtttgacaat
cactggggaagagtagattatgatgccgtgattccagccgagaaaattgcagaattgaat
cttcagtcgattgtttaccaggaaaacttaggagagatccaaccatgtcgtgcacctttg
aaaaaaggtggactttgtcagagaagagacttgaaggtttgcccatttcatgggcccatt
atacctcgtgatgatgcaggaaaccaaatcaatcagagttcttcaacagatgatacagat
cctggtttaggctctgatttagcagagcagttagcaaaacaagctgtgaagaatgttagg
gagcgagataaagaggatgcgaggaagagaaaacttgataaacagtcattacagcgggaa
aagctagcaagagttcgggagcacaatgatgctgttcttcgtgatgctgcaatagcttca
acatcaagatcaacagtttttggagaagacatgggggaaactgttggtgagaatccagtt
gggagaaacaaacaaactctagcatcaatgctgcggaagaaagttacaacgaaagatagg
ttagctcagagacttttgaacacccgggcaacagaggcaacgctaagacagatgacccag
ggtgaggatgcaacttatagagaaacatttcccaatcaatggtag
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