KEGG   Gossypium arboreum (tree cotton): 108467512
Entry
108467512         CDS       T05776                                 
Name
(RefSeq) pre-mRNA-splicing factor 38
  KO
K12849  pre-mRNA-splicing factor 38A
Organism
gab  Gossypium arboreum (tree cotton)
Pathway
gab03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:gab00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    108467512
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:gab03041]
    108467512
Spliceosome [BR:gab03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U4/U6.U5 tri-snRNP related factors
    108467512
 Complex C
   U4/U6.U5 tri-SnRNP related factors
    108467512
SSDB
Motif
Pfam: PRP38 PRP38_assoc HIND
Other DBs
NCBI-GeneID: 108467512
NCBI-ProteinID: XP_017623634
UniProt: A0A0B0P1S4
LinkDB
Position
10:27067861..27072620
AA seq 380 aa
MANRTDPAAKSIRGTNPQNLVEKIVRSKIYQNTYWKEQCFGLTAETLVDKAMELDHIGGT
YGGNRKPTPFMCLVMKMLQIQPEKDIVVEFIKNDDYKYVRVLGAFYLRLTGIDSDIYRYL
EPLYNDYRKVRRKSPDGNFMLTHVDEVIDELLTRDYSCDIALPRIKKRWTLESLGVLDAR
KSVLEDDFEEEEEKDEMEQDGLEEEVAHEKDYYRARSPARERERDWRRDSHRHRDRDYDR
DRDYDRERGRGRDRERDRDRDRDRDRDRYRLREEKEYGYERERDREREGRERDRRDRERG
RRRSRSRSRSRERKRHGRSSMSPRRHEAEDGNAPEESKKKGKKEKKEKKEKKDDGTDHPD
PEIAEANRIRASLGLKPLKL
NT seq 1143 nt   +upstreamnt  +downstreamnt
atggccaaccgtaccgacccggcggcgaagagcattaggggaaccaaccctcagaatctg
gtcgaaaagatcgtgcgctcgaagatataccagaatacgtactggaaggagcagtgtttc
ggtctgacggcggagacactggttgacaaggcaatggagctcgaccacatcggcggaact
tacggcggaaatcggaagcccactcctttcatgtgccttgtcatgaaaatgcttcaaatc
caacccgaaaaggatattgtcgtcgaattcatcaaaaacgacgattacaagtatgtacga
gttctgggagctttttatctgcgtcttacggggatcgactccgatatttatcgttattta
gagcctttgtacaacgattatcggaaagtaaggcgaaaatcacctgatggaaatttcatg
ttgactcatgttgatgaggttattgatgaacttctcaccagagactactcctgtgatatt
gctctaccacgtattaagaaaagatggactcttgaatcgcttggtgtactggatgcaaga
aaaagcgtgctggaagatgattttgaggaagaagaagagaaggatgagatggagcaagat
ggtttagaagaggaggtagctcatgaaaaggattattaccgagcgagaagccctgctaga
gagagagaaagggattggagacgtgacagtcatagacacagggatcgggattatgacaga
gatagagactatgatagagaaaggggacgcggccgtgacagagagagggacagagatagg
gatagggatagggatagagatcggtatcgcctgagagaggaaaaggagtatgggtatgag
agggagcgagatagagagagggaaggtagggagcgtgataggcgagacagggagcgtggc
agacgaaggagccgttcaaggagtaggagtagggagcggaagagacatggtcgcagtagt
atgagtccgagaaggcatgaagcagaggatggtaatgctccagaagagtcaaagaagaag
ggaaagaaagaaaagaaagaaaagaaggaaaagaaggatgatggaacggaccaccctgat
ccagagattgctgaagccaacaggattcgagcatccctaggtttgaaaccattgaaattg
taa

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