Gossypium arboreum (tree cotton): 108467512
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Entry
108467512 CDS
T05776
Name
(RefSeq) pre-mRNA-splicing factor 38
KO
K12849
pre-mRNA-splicing factor 38A
Organism
gab
Gossypium arboreum (tree cotton)
Pathway
gab03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
gab00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
108467512
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
gab03041
]
108467512
Spliceosome [BR:
gab03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
108467512
Complex C
U4/U6.U5 tri-SnRNP related factors
108467512
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Gene cluster
GFIT
Motif
Pfam:
PRP38
PRP38_assoc
HIND
Motif
Other DBs
NCBI-GeneID:
108467512
NCBI-ProteinID:
XP_017623634
UniProt:
A0A0B0P1S4
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Position
10:27067861..27072620
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AA seq
380 aa
AA seq
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MANRTDPAAKSIRGTNPQNLVEKIVRSKIYQNTYWKEQCFGLTAETLVDKAMELDHIGGT
YGGNRKPTPFMCLVMKMLQIQPEKDIVVEFIKNDDYKYVRVLGAFYLRLTGIDSDIYRYL
EPLYNDYRKVRRKSPDGNFMLTHVDEVIDELLTRDYSCDIALPRIKKRWTLESLGVLDAR
KSVLEDDFEEEEEKDEMEQDGLEEEVAHEKDYYRARSPARERERDWRRDSHRHRDRDYDR
DRDYDRERGRGRDRERDRDRDRDRDRDRYRLREEKEYGYERERDREREGRERDRRDRERG
RRRSRSRSRSRERKRHGRSSMSPRRHEAEDGNAPEESKKKGKKEKKEKKEKKDDGTDHPD
PEIAEANRIRASLGLKPLKL
NT seq
1143 nt
NT seq
+upstream
nt +downstream
nt
atggccaaccgtaccgacccggcggcgaagagcattaggggaaccaaccctcagaatctg
gtcgaaaagatcgtgcgctcgaagatataccagaatacgtactggaaggagcagtgtttc
ggtctgacggcggagacactggttgacaaggcaatggagctcgaccacatcggcggaact
tacggcggaaatcggaagcccactcctttcatgtgccttgtcatgaaaatgcttcaaatc
caacccgaaaaggatattgtcgtcgaattcatcaaaaacgacgattacaagtatgtacga
gttctgggagctttttatctgcgtcttacggggatcgactccgatatttatcgttattta
gagcctttgtacaacgattatcggaaagtaaggcgaaaatcacctgatggaaatttcatg
ttgactcatgttgatgaggttattgatgaacttctcaccagagactactcctgtgatatt
gctctaccacgtattaagaaaagatggactcttgaatcgcttggtgtactggatgcaaga
aaaagcgtgctggaagatgattttgaggaagaagaagagaaggatgagatggagcaagat
ggtttagaagaggaggtagctcatgaaaaggattattaccgagcgagaagccctgctaga
gagagagaaagggattggagacgtgacagtcatagacacagggatcgggattatgacaga
gatagagactatgatagagaaaggggacgcggccgtgacagagagagggacagagatagg
gatagggatagggatagagatcggtatcgcctgagagaggaaaaggagtatgggtatgag
agggagcgagatagagagagggaaggtagggagcgtgataggcgagacagggagcgtggc
agacgaaggagccgttcaaggagtaggagtagggagcggaagagacatggtcgcagtagt
atgagtccgagaaggcatgaagcagaggatggtaatgctccagaagagtcaaagaagaag
ggaaagaaagaaaagaaagaaaagaaggaaaagaaggatgatggaacggaccaccctgat
ccagagattgctgaagccaacaggattcgagcatccctaggtttgaaaccattgaaattg
taa
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